Full-length genome sequence of segmented RNA virus from ticks was obtained using small RNA sequencing data

The role of long non-coding RNAs in mediating chemoresistance by modulating autophagy in cancer

(2020) Ke-Tao Jin et al.   RNA Biology

Precise annotation of tick mitochondrial genomes reveals multiple copy number variation of short tandem repeats and one transposon-like element

(2020) Ze Chen et al.   BMC GENOMICS

Using Pan RNA-Seq Analysis to Reveal the Ubiquitous Existence of 5′ and 3′ End Small RNAs

(2019) Xiaofeng Xu et al.   Frontiers in Genetics

DNA segments of African Swine Fever Virus detected for the first time in hard ticks from sheep and bovines

(2019) Ze Chen et al.   SYSTEMATIC AND APPLIED ACAROLOGY

Using high-resolution annotation of insect mitochondrial DNA to decipher tandem repeats in the control region

(2019) Haishuo Ji et al.   RNA Biology

Viral metagenomics, genetic and evolutionary characteristics of Crimean-Congo hemorrhagic fever orthonairovirus in humans, Kosovo

(2018) Petra Emmerich et al.   INFECTION GENETICS AND EVOLUTION

Complemented Palindromic Small RNAs First Discovered from SARS Coronavirus

(2018) Chang Liu et al.   Genes

Extensive Diversity of RNA Viruses in Australian Ticks

(2018) Erin Harvey et al.   JOURNAL OF VIROLOGY

Two featured series of rRNA-derived RNA fragments (rRFs) constitute a novel class of small RNAs

(2017) Ze Chen et al.   PLoS One

VirusDetect: An automated pipeline for efficient virus discovery using deep sequencing of small RNAs

(2017) Yi Zheng et al.   VIROLOGY

Identification of an anellovirus and genomoviruses in ixodid ticks

(2017) Kara Waits et al.   VIRUS GENES

Using Small RNA-seq Data to Detect siRNA Duplexes Induced by Plant Viruses

(2017) Xiaoran Niu et al.   Genes

Using Small RNA Deep Sequencing Data to Detect Human Viruses

(2016) Fang Wang et al.   Biomed Research International

Characterisation of divergent flavivirus NS3 and NS5 protein sequences detected in Rhipicephalus microplus ticks from Brazil

(2014) Sandra Regina Maruyama et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

An Efficient Strategy of Screening for Pathogens in Wild-Caught Ticks and Mosquitoes by Reusing Small RNA Deep Sequencing Data

(2014) Lu Zhuang et al.   PLoS One

Deep Sequencing of Small RNAs in Tomato for Virus and Viroid Identification and Strain Differentiation

(2012) Rugang Li et al.   PLoS One

Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses

(2009) Jan F. Kreuze et al.   VIROLOGY

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS