Identification of QTNs and Their Candidate Genes for 100-Seed Weight in Soybean (Glycine max L.) Using Multi-Locus Genome-Wide Association Studies

Genetic dissection of yield-related traits via genome-wide association analysis across multiple environments in wild soybean (Glycine soja Sieb. and Zucc.)

(2020) Dezhou Hu et al.   PLANTA

Editorial: The Applications of New Multi-Locus GWAS Methodologies in the Genetic Dissection of Complex Traits

(2019) Yuan-Ming Zhang et al.   Frontiers in Plant Science

Genome-wide association study of four yield-related traits at the R6 stage in soybean

(2019) Xiangnan Li et al.   BMC GENETICS

Identifying a wild allele conferring small seed size, high protein content and low oil content using chromosome segment substitution lines in soybean

(2019) Hongyan Yang et al.   THEORETICAL AND APPLIED GENETICS

Genome wide association mapping and candidate gene analysis for hundred seed weight in soybean [Glycine max (L.) Merrill]

(2019) Xue Zhao et al.   BMC GENOMICS

Genome-wide associations and epistatic interactions for internode number, plant height, seed weight and seed yield in soybean

(2019) Teshale Assefa et al.   BMC GENOMICS

Assessment of Phenotypic Variations and Correlation among Seed Composition Traits in Mutagenized Soybean Populations

(2019) Zhou Zhou et al.   Genes

Genome-wide association mapping for seed protein and oil contents using a large panel of soybean accessions

(2018) Dongmei Li et al.   GENOMICS

Genetic Dissection of Maize Embryonic Callus Regenerative Capacity Using Multi-Locus Genome-Wide Association Studies

(2018) Langlang Ma et al.   Frontiers in Plant Science

Genome-Wide Association Mapping of Starch Pasting Properties in Maize Using Single-Locus and Multi-Locus Models

(2018) Yang Xu et al.   Frontiers in Plant Science

The Application of Multi-Locus GWAS for the Detection of Salt-Tolerance Loci in Rice

(2018) Yanru Cui et al.   Frontiers in Plant Science

Identification of the Genomic Region Underlying Seed Weight per Plant in Soybean (Glycine max L. Merr.) via High-Throughput Single-Nucleotide Polymorphisms and a Genome-Wide Association Study

(2018) Yan Jing et al.   Frontiers in Plant Science

pKWmEB: integration of Kruskal–Wallis test with empirical Bayes under polygenic background control for multi-locus genome-wide association study

(2017) Wen-Long Ren et al.   HEREDITY

pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies

(2017) J Zhang et al.   HEREDITY

Identification of regulatory networks and hub genes controlling soybean seed set and size using RNA sequencing analysis

(2017) Juan Du et al.   JOURNAL OF EXPERIMENTAL BOTANY

Differential expression of a WRKY gene between wild and cultivated soybeans correlates to seed size

(2017) Yongzhe Gu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome and transcriptome-wide analyses of cellulose synthase gene superfamily in soybean

(2017) Muhammad Amjad Nawaz et al.   JOURNAL OF PLANT PHYSIOLOGY

A PP2C-1 Allele Underlying a Quantitative Trait Locus Enhances Soybean 100-Seed Weight

(2017) Xiang Lu et al.   Molecular Plant

Iterative sure independence screening EM-Bayesian LASSO algorithm for multi-locus genome-wide association studies

(2017) Cox Lwaka Tamba et al.   PLoS Computational Biology

The transcriptomic signature of developing soybean seeds reveals the genetic basis of seed trait adaptation during domestication

(2016) Xiang Lu et al.   PLANT JOURNAL

Development and application of a novel genome-wide SNP array reveals domestication history in soybean

(2016) Jiao Wang et al.   Scientific Reports

Identification and Validation of Candidate Genes Associated with Domesticated and Improved Traits in Soybean

(2016) Ling Zhou et al.   Plant Genome

Improving power and accuracy of genome-wide association studies via a multi-locus mixed linear model methodology

(2016) Shi-Bo Wang et al.   Scientific Reports

Transcriptome-wide functional characterization reveals novel relationships among differentially expressed transcripts in developing soybean embryos

(2015) Delasa Aghamirzaie et al.   BMC GENOMICS

Linkage mapping, molecular cloning and functional analysis of soybean gene Fg3 encoding flavonol 3-O-glucoside/galactoside (1 → 2) glucosyltransferase

(2015) Shaokang Di et al.   BMC PLANT BIOLOGY

Analysis of quantitative trait loci for main plant traits in soybean

(2015) D. Yao et al.   GENETICS AND MOLECULAR RESEARCH

Establishment of a 100-seed weight quantitative trait locus–allele matrix of the germplasm population for optimal recombination design in soybean breeding programmes

(2015) Yinghu Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

Genome-wide association study, genomic prediction and marker-assisted selection for seed weight in soybean (Glycine max)

(2015) Jiaoping Zhang et al.   THEORETICAL AND APPLIED GENETICS

Identification of domestication-related loci associated with flowering time and seed size in soybean with the RAD-seq genotyping method

(2015) Ling Zhou et al.   Scientific Reports

Exploration of presence/absence variation and corresponding polymorphic markers in soybean genome

(2014) Yufeng Wang et al.   Journal of Integrative Plant Biology

Identification of new QTLs for seed mineral, cysteine, and methionine concentrations in soybean [Glycine max (L.) Merr.]

(2014) Raghuprakash Kastoori Ramamurthy et al.   MOLECULAR BREEDING

Fine mapping of quantitative trait loci for seed size traits in soybean

(2014) Fang-Teng Xie et al.   MOLECULAR BREEDING

Identification and validation of an over-dominant QTL controlling soybean seed weight using populations derived fromGlycine max × Glycine soja

(2014) Long Yan et al.   PLANT BREEDING

A major and stable QTL associated with seed weight in soybean across multiple environments and genetic backgrounds

(2014) Shin Kato et al.   THEORETICAL AND APPLIED GENETICS

Genetic Mapping and Confirmation of Quantitative Trait Loci for Seed Protein and Oil Contents and Seed Weight in Soybean

(2013) Safiullah M. Pathan et al.   CROP SCIENCE

Underestimation of heritability using a mixed model with a polygenic covariance structure in a genome-wide association study for complex traits

(2013) Hyunju Ryoo et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Mapping Quantitative Trait Loci by Controlling Polygenic Background Effects

(2013) S. Xu   GENETICS

Association mapping for seed size and shape traits in soybean cultivars

(2013) Yuan Niu et al.   MOLECULAR BREEDING

Identification of QTLs for seed and pod traits in soybean and analysis for additive effects and epistatic effects of QTLs among multiple environments

(2013) Zhe Yang et al.   MOLECULAR GENETICS AND GENOMICS

BSKs are partially redundant positive regulators of brassinosteroid signaling in Arabidopsis

(2013) Shivakumar Sreeramulu et al.   PLANT JOURNAL

Using RNA-Seq to Profile Soybean Seed Development from Fertilization to Maturity

(2013) Sarah I. Jones et al.   PLoS One

QTL affecting fitness of hybrids between wild and cultivated soybeans in experimental fields

(2013) Yosuke Kuroda et al.   Ecology and Evolution

Multi-environment mapping and meta-analysis of 100-seed weight in soybean

(2012) Ya-nan Sun et al.   MOLECULAR BIOLOGY REPORTS

QTL analysis of soybean seed weight across multi-genetic backgrounds and environments

(2012) Yingpeng Han et al.   THEORETICAL AND APPLIED GENETICS

The Mechanisms of Brassinosteroids' Action: From Signal Transduction to Plant Development

(2011) Cang-Jin Yang et al.   Molecular Plant

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Brassinosteroid Signal Transduction: From Receptor Kinase Activation to Transcriptional Networks Regulating Plant Development

(2011) Steven D. Clouse   PLANT CELL

Genetic dissection of methylcrotonyl CoA carboxylase indicates a complex role for mitochondrial leucine catabolism during seed development and germination

(2011) Geng Ding et al.   PLANT JOURNAL

The chloroplast ribosomal protein L21 gene is essential for plastid development and embryogenesis in Arabidopsis

(2011) Tuanzhang Yin et al.   PLANTA

Identification of single nucleotide polymorphisms and haplotypes associated with yield and yield components in soybean (Glycine max) landraces across multiple environments

(2011) Derong Hao et al.   THEORETICAL AND APPLIED GENETICS

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

(2010) Andrew J Severin et al.   BMC PLANT BIOLOGY

Transcriptional and hormonal signaling control of Arabidopsis seed development

(2010) Xiaodong Sun et al.   CURRENT OPINION IN PLANT BIOLOGY

Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

(2010) Hon-Ming Lam et al.   NATURE GENETICS

Mapping quantitative trait loci for seed size traits in soybean (Glycine max L. Merr.)

(2010) Yu Xu et al.   THEORETICAL AND APPLIED GENETICS

Identification of QTL underlying soluble pigment content in soybean stems related to resistance to soybean white mold (Sclerotinia sclerotiorum)

(2009) Dongmei Li et al.   EUPHYTICA

SHORT HYPOCOTYL UNDER BLUE1 Associates with MINISEED3 and HAIKU2 Promoters in Vivo to Regulate Arabidopsis Seed Development

(2009) Y. Zhou et al.   PLANT CELL

QTL analyses of seed weight during the development of soybean (Glycine max L. Merr.)

(2008) W Teng et al.   HEREDITY

Advances in molecular marker techniques and their applications in plant sciences

(2008) Milee Agarwal et al.   PLANT CELL REPORTS