Temporal Variability and Ecological Interactions of Parasitic Marine Syndiniales in Coastal Protist Communities

Diatoms Are Selective Segregators in Global Ocean Planktonic Communities

(2020) Flora Vincent et al.   mSystems

The planktonic protist interactome: where do we stand after a century of research?

(2019) Marit F. Markussen Bjorbækmo et al.   ISME Journal

Protist Interactions and Community Structure During Early Autumn in the Kerguelen Region (Southern Ocean)

(2019) Ingrid Sassenhagen et al.   PROTIST

Protistan parasites along oxygen gradients in a seasonally anoxic fjord: A network approach to assessing potential host-parasite interactions

(2018) Mónica Torres-Beltrán et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Dynamics and interactions of highly resolved marine plankton via automated high-frequency sampling

(2018) David M. Needham et al.   ISME Journal

Short-term dynamics and interactions of marine protist communities during the spring–summer transition

(2018) Lyria Berdjeb et al.   ISME Journal

Short-term estimates of phytoplankton growth and mortality in a tidal estuary

(2018) Sean R. Anderson et al.   LIMNOLOGY AND OCEANOGRAPHY

A globally distributed Syndiniales parasite dominates the Southern Ocean micro-eukaryote community near the sea-ice edge

(2018) Laurence J. Clarke et al.   ISME Journal

Amphidoma languida (Amphidomatacea, Dinophyceae) with a novel azaspiracid toxin profile identified as the cause of molluscan contamination at the Atlantic coast of southern Spain

(2017) Urban Tillmann et al.   HARMFUL ALGAE

Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters

(2017) David M Needham et al.   ISME Journal

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

(2017) Benjamin J Callahan et al.   ISME Journal

Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities

(2016) Ian M. Bradley et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Seasonal dynamics of dissolved, particulate and microbial components of a tidal saltmarsh-dominated estuary under contrasting levels of freshwater discharge

(2016) Thais B. Bittar et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Ecological impacts of parasitic chytrids, syndiniales and perkinsids on populations of marine photosynthetic dinoflagellates

(2016) Thomas G. Jephcott et al.   Fungal Ecology

Correlation detection strategies in microbial data sets vary widely in sensitivity and precision

(2016) Sophie Weiss et al.   ISME Journal

Unexpected prevalence of parasite 18S rDNA sequences in winter among Antarctic marine protists

(2016) Alison C. Cleary et al.   JOURNAL OF PLANKTON RESEARCH

Metabarcoding reveals environmental factors influencing spatio-temporal variation in pelagic micro-eukaryotes

(2016) Pamela M. Brannock et al.   MOLECULAR ECOLOGY

Pronounced daily succession of phytoplankton, archaea and bacteria following a spring bloom

(2016) David M. Needham et al.   Nature Microbiology

Estimating Protistan Diversity Using High-Throughput Sequencing

(2015) Sarah K. Hu et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Marine microbial community dynamics and their ecological interpretation

(2015) Jed A. Fuhrman et al.   NATURE REVIEWS MICROBIOLOGY

Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes

(2015) A. Z. Worden et al.   SCIENCE

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Determinants of community structure in the global plankton interactome

(2015) G. Lima-Mendez et al.   SCIENCE

circlize implements and enhances circular visualization in R

(2014) Zuguang Gu et al.   BIOINFORMATICS

Genomic Insights into Processes Driving the Infection of Alexandrium tamarense by the Parasitoid Amoebophrya sp.

(2014) Yameng Lu et al.   EUKARYOTIC CELL

Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

(2014) Jacob A Cram et al.   ISME Journal

Parasitic infection of the diatom Guinardia delicatula, a recurrent and ecologically important phenomenon on the New England Shelf

(2014) EE Peacock et al.   MARINE ECOLOGY PROGRESS SERIES

Parasitism of harmful dinoflagellates in Korean coastal waters

(2013) Myung Gil Park et al.   HARMFUL ALGAE

Amoebophryaspp. from the Bloom-forming DinoflagellateCochlodinium polykrikoides: Parasites not Nested in the “Amoebophrya ceratiiComplex”

(2013) Sunju Kim et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Microzooplankton grazing in the oceans: impacts, data variability, knowledge gaps and future directions

(2013) Claire Schmoker et al.   JOURNAL OF PLANKTON RESEARCH

Routine determination of plankton community composition and size structure: a comparison between FlowCAM and light microscopy

(2013) Eva Álvarez et al.   JOURNAL OF PLANKTON RESEARCH

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

A Quantitative Assessment of the Role of the Parasite Amoebophrya in the Termination of Alexandrium fundyense Blooms within a Small Coastal Embayment

(2013) Lourdes Velo-Suárez et al.   PLoS One

Infection dynamics of Amoebophryidae parasitoids on harmful dinoflagellates in a southern Chilean fjord dominated by diatoms

(2012) C Alves-de-SSouza et al.   AQUATIC MICROBIAL ECOLOGY

Single cell genomics: an individual look at microbes

(2012) Ramunas Stepanauskas   CURRENT OPINION IN MICROBIOLOGY

Revision of the Family Duboscquellidae with Description of Euduboscquella crenulata n. gen., n. sp. (Dinoflagellata, Syndinea), an Intracellular Parasite of the Ciliate Favella panamensis Kofoid & Campbell,

(2012) D. Wayne Coats et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

(2012) Laure Guillou et al.   NUCLEIC ACIDS RESEARCH

Radiolaria Associated with Large Diversity of Marine Alveolates

(2012) Jon Bråte et al.   PROTIST

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

Marine Protistan Diversity

(2011) David A. Caron et al.   Annual Review of Marine Science

Molecular Diversity of the Syndinean Genus Euduboscquella Based on Single-Cell PCR Analysis

(2011) Tsvetan R. Bachvaroff et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Parasitism as a biological control agent of dinoflagellate blooms in the California Current System

(2011) Fernanda F.M. Mazzillo et al.   HARMFUL ALGAE

Marine bacterial, archaeal and protistan association networks reveal ecological linkages

(2011) Joshua A Steele et al.   ISME Journal

Zoosporic true fungi in marine ecosystems: a review

(2011) Frank H. Gleason et al.   MARINE AND FRESHWATER RESEARCH

Low Evolutionary Diversification in a Widespread and Abundant Uncultured Protist (MAST-4)

(2011) R. Rodriguez-Martinez et al.   MOLECULAR BIOLOGY AND EVOLUTION

Interplay Between the Parasite Amoebophrya sp. (Alveolata) and the Cyst Formation of the Red Tide Dinoflagellate Scrippsiella trochoidea

(2011) Aurélie Chambouvet et al.   PROTIST

Genetic diversity of Amoebophryidae (Syndiniales) during Alexandrium catenella/tamarense (Dinophyceae) blooms in the Thau lagoon (Mediterranean Sea, France)

(2011) Aurélie Chambouvet et al.   RESEARCH IN MICROBIOLOGY

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

(2010) THORSTEN STOECK et al.   MOLECULAR ECOLOGY

The inverse niche model for food webs with parasites

(2010) Christopher P. Warren et al.   Theoretical Ecology

Infection by Amoebophrya spp. parasitoids of dinoflagellates in a tropical marine coastal area

(2009) PS Salomon et al.   AQUATIC MICROBIAL ECOLOGY

A Decade of Change in the Skidaway River Estuary. III. Plankton

(2009) Peter G. Verity et al.   Estuaries and Coasts

New Insights into the Diversity of Marine Picoeukaryotes

(2009) Fabrice Not et al.   PLoS One

Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR

(2008) A. Godhe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Responsibility of microzooplankton and parasite pressure for the demise of toxic dinoflagellate blooms

(2008) DJS Montagnes et al.   AQUATIC MICROBIAL ECOLOGY

Widespread occurrence and genetic diversity of marine parasitoids belonging toSyndiniales(Alveolata)

(2008) L. Guillou et al.   ENVIRONMENTAL MICROBIOLOGY

Aldehyde-induced insidious effects cannot be considered as a diatom defence mechanism against copepods

(2008) KJ Flynn et al.   MARINE ECOLOGY PROGRESS SERIES

Control of Toxic Marine Dinoflagellate Blooms by Serial Parasitic Killers

(2008) A. Chambouvet et al.   SCIENCE