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Title
Estimating Protistan Diversity Using High-Throughput Sequencing
Authors
Keywords
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Journal
JOURNAL OF EUKARYOTIC MICROBIOLOGY
Volume 62, Issue 5, Pages 688-693
Publisher
Wiley
Online
2015-04-08
DOI
10.1111/jeu.12217
References
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Note: Only part of the references are listed.- Investigating Microbial Eukaryotic Diversity from a Global Census: Insights from a Comparison of Pyrotag and Full-Length Sequences of 18S rRNA Genes
- (2014) Alle A. Y. Lie et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
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- Evaluating the potential of 18S rDNA clone libraries to complement pyrosequencing data of marine protists with near full-length sequence information
- (2014) Christian Wolf et al. Marine Biology Research
- Placing Environmental Next-Generation Sequencing Amplicons from Microbial Eukaryotes into a Phylogenetic Context
- (2014) Micah Dunthorn et al. MOLECULAR BIOLOGY AND EVOLUTION
- Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers
- (2014) Kenan Hadziavdic et al. PLoS One
- Systematic Design of 18S rRNA Gene Primers for Determining Eukaryotic Diversity in Microbial Consortia
- (2014) Luisa W. Hugerth et al. PLoS One
- Intracellular Diversity of the V4 and V9 Regions of the 18S rRNA in Marine Protists (Radiolarians) Assessed by High-Throughput Sequencing
- (2014) Johan Decelle et al. PLoS One
- Diversity of diversity: conceptual and methodological differences in biodiversity estimates of eukaryotic microbes as compared to bacteria
- (2014) Jean-David Grattepanche et al. TRENDS IN MICROBIOLOGY
- Towards a Molecular Taxonomy for Protists: Benefits, Risks, and Applications in Plankton Ecology
- (2013) David A. Caron JOURNAL OF EUKARYOTIC MICROBIOLOGY
- General Patterns of Diversity in Major Marine Microeukaryote Lineages
- (2013) Massimo C. Pernice et al. PLoS One
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- Comparing the Hyper-Variable V4 and V9 Regions of the Small Subunit rDNA for Assessment of Ciliate Environmental Diversity
- (2012) Micah Dunthorn et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Hypervariable regions (V1–V9) of the dinoflagellate 18S rRNA using a large dataset for marker considerations
- (2011) Jang-Seu Ki JOURNAL OF APPLIED PHYCOLOGY
- Short rDNA Barcodes for Species Identification in Foraminifera
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- (2010) Minseok Kim et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Seasonal analysis of protistan community structure and diversity at the USC Microbial Observatory (San Pedro Channel, North Pacific Ocean)
- (2010) Peter D. Countway et al. LIMNOLOGY AND OCEANOGRAPHY
- Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
- (2010) THORSTEN STOECK et al. MOLECULAR ECOLOGY
- Comparison of Species Richness Estimates Obtained Using Nearly Complete Fragments and Simulated Pyrosequencing-Generated Fragments in 16S rRNA Gene-Based Environmental Surveys
- (2009) N. Youssef et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Multigene phylogenies of clonal Spumella-like strains, a cryptic heterotrophic nanoflagellate, isolated from different geographical regions
- (2008) T. Stoeck et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
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