Perturbing proteomes at single residue resolution using base editing
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Perturbing proteomes at single residue resolution using base editing
Authors
Keywords
-
Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-04-20
DOI
10.1038/s41467-020-15796-7
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Cytosine base editor generates substantial off-target single-nucleotide variants in mouse embryos
- (2019) Erwei Zuo et al. SCIENCE
- Protocol Update for large-scale genome and gene function analysis with the PANTHER classification system (v.14.0)
- (2019) Huaiyu Mi et al. Nature Protocols
- beditor: A Computational Workflow for Designing Libraries of Guide RNAs for CRISPR-Mediated Base Editing
- (2019) Rohan Dandage et al. GENETICS
- Genome-scale engineering of Saccharomyces cerevisiae with single-nucleotide precision
- (2018) Zehua Bao et al. NATURE BIOTECHNOLOGY
- High-throughput creation and functional profiling of DNA sequence variant libraries using CRISPR–Cas9 in yeast
- (2018) Xiaoge Guo et al. NATURE BIOTECHNOLOGY
- Multiplexed precision genome editing with trackable genomic barcodes in yeast
- (2018) Kevin R Roy et al. NATURE BIOTECHNOLOGY
- Highly parallel genome variant engineering with CRISPR–Cas9
- (2018) Meru J. Sadhu et al. NATURE GENETICS
- Quantitative Missense Variant Effect Prediction Using Large-Scale Mutagenesis Data
- (2018) Vanessa E. Gray et al. Cell Systems
- Functional Genetic Variants Revealed by Massively Parallel Precise Genome Editing
- (2018) Eilon Sharon et al. CELL
- Engineered CRISPR-Cas9 nuclease with expanded targeting space
- (2018) Hiroshi Nishimasu et al. SCIENCE
- Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor
- (2018) Andrew C.K. Wu et al. MOLECULAR CELL
- A resource of variant effect predictions of single nucleotide variants in model organisms
- (2018) Omar Wagih et al. Molecular Systems Biology
- Predicting the mutations generated by repair of Cas9-induced double-strand breaks
- (2018) Felicity Allen et al. NATURE BIOTECHNOLOGY
- Base editing: precision chemistry on the genome and transcriptome of living cells
- (2018) Holly A. Rees et al. NATURE REVIEWS GENETICS
- UniProt: a worldwide hub of protein knowledge
- (2018) NUCLEIC ACIDS RESEARCH
- Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage
- (2017) Nicole M. Gaudelli et al. NATURE
- Genome-wide target specificities of CRISPR RNA-guided programmable deaminases
- (2017) Daesik Kim et al. NATURE BIOTECHNOLOGY
- Functional mapping of yeast genomes by saturated transposition
- (2017) Agnès H Michel et al. eLife
- Pooled-matrix protein interaction screens using Barcode Fusion Genetics
- (2016) N. Yachie et al. Molecular Systems Biology
- Targeted AID-mediated mutagenesis (TAM) enables efficient genomic diversification in mammalian cells
- (2016) Yunqing Ma et al. NATURE METHODS
- Directed evolution using dCas9-targeted somatic hypermutation in mammalian cells
- (2016) Gaelen T Hess et al. NATURE METHODS
- Teleseismic S wave microseisms
- (2016) K. Nishida et al. SCIENCE
- A genome-wide imaging-based screening to identify genes involved in synphilin-1 inclusion formation in Saccharomyces cerevisiae
- (2016) Lei Zhao et al. Scientific Reports
- CRISPR-Cas systems for editing, regulating and targeting genomes
- (2014) Jeffry D Sander et al. NATURE BIOTECHNOLOGY
- Rational design of highly active sgRNAs for CRISPR-Cas9–mediated gene inactivation
- (2014) John G Doench et al. NATURE BIOTECHNOLOGY
- Improved vectors and genome-wide libraries for CRISPR screening
- (2014) Neville E Sanjana et al. NATURE METHODS
- Deep mutational scanning: a new style of protein science
- (2014) Douglas M Fowler et al. NATURE METHODS
- Translation of Small Open Reading Frames within Unannotated RNA Transcripts in Saccharomyces cerevisiae
- (2014) Jenna E. Smith et al. Cell Reports
- Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
- (2013) Lei S. Qi et al. CELL
- PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome
- (2013) Jaime Huerta-Cepas et al. NUCLEIC ACIDS RESEARCH
- Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems
- (2013) James E. DiCarlo et al. NUCLEIC ACIDS RESEARCH
- Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells
- (2013) Ophir Shalem et al. SCIENCE
- Design and Analysis of Bar-seq Experiments
- (2013) David G. Robinson et al. G3-Genes Genomes Genetics
- PANDAseq: paired-end assembler for illumina sequences
- (2012) Andre P Masella et al. BMC BIOINFORMATICS
- The Genomic Landscape and Evolutionary Resolution of Antagonistic Pleiotropy in Yeast
- (2012) Wenfeng Qian et al. Cell Reports
- Large-Scale Screening for Targeted Knockouts in the Caenorhabditis elegans Genome
- (2012) G3-Genes Genomes Genetics
- Targeted detection of in vivo endogenous DNA base damage reveals preferential base excision repair in the transcribed strand
- (2011) António M. C. Reis et al. NUCLEIC ACIDS RESEARCH
- Saccharomyces Genome Database: the genomics resource of budding yeast
- (2011) J. M. Cherry et al. NUCLEIC ACIDS RESEARCH
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds
- (2009) Cheuk Hei Ho et al. NATURE BIOTECHNOLOGY
- Global Analysis of Cdk1 Substrate Phosphorylation Sites Provides Insights into Evolution
- (2009) L. J. Holt et al. SCIENCE
- Weak functional constraints on phosphoproteomes
- (2009) Christian R. Landry et al. TRENDS IN GENETICS
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- A Multidimensional Chromatography Technology for In-depth Phosphoproteome Analysis
- (2008) Claudio P. Albuquerque et al. MOLECULAR & CELLULAR PROTEOMICS
- An in Vivo Map of the Yeast Protein Interactome
- (2008) K. Tarassov et al. SCIENCE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started