Colibactin DNA-damage signature indicates mutational impact in colorectal cancer
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Title
Colibactin DNA-damage signature indicates mutational impact in colorectal cancer
Authors
Keywords
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Journal
NATURE MEDICINE
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-06-02
DOI
10.1038/s41591-020-0908-2
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Related references
Note: Only part of the references are listed.- Depurination of Colibactin-Derived Interstrand Cross-Links
- (2020) Mengzhao Xue et al. BIOCHEMISTRY
- Mutational signature in colorectal cancer caused by genotoxic pks+ E. coli
- (2020) Cayetano Pleguezuelos-Manzano et al. NATURE
- The repertoire of mutational signatures in human cancer
- (2020) Ludmil B. Alexandrov et al. NATURE
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- (2019) Rachel M. Bleich et al. SCIENCE
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- (2019) Matthew R. Wilson et al. SCIENCE
- Spatial Chromosome Folding and Active Transcription Drive DNA Fragility and Formation of Oncogenic MLL Translocations
- (2019) Henrike Johanna Gothe et al. MOLECULAR CELL
- Structure elucidation of colibactin and its DNA cross-links
- (2019) Mengzhao Xue et al. SCIENCE
- The landscape of somatic mutation in normal colorectal epithelial cells
- (2019) Henry Lee-Six et al. NATURE
- Comprehensive Characterization of Cancer Driver Genes and Mutations
- (2018) Matthew H. Bailey et al. CELL
- Cancer Genome Interpreter annotates the biological and clinical relevance of tumor alterations
- (2018) David Tamborero et al. Genome Medicine
- Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines
- (2018) Kyle Ellrott et al. Cell Systems
- Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse
- (2018) Anthony Tubbs et al. CELL
- Discovery of potential causative mutations in human coding and noncoding genome with the interactive software BasePlayer
- (2018) Riku Katainen et al. Nature Protocols
- COSMIC: the Catalogue Of Somatic Mutations In Cancer
- (2018) John G Tate et al. NUCLEIC ACIDS RESEARCH
- Colibactin assembly line enzymes use S-adenosylmethionine to build a cyclopropane ring
- (2017) Li Zha et al. Nature Chemical Biology
- A damaged genome’s transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks
- (2017) Fabio Iannelli et al. Nature Communications
- Characterization of Polyketide Synthase Machinery from the pks Island Facilitates Isolation of a Candidate Precolibactin
- (2016) Li Zha et al. ACS Chemical Biology
- The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes
- (2016) G.C.P. van Zundert et al. JOURNAL OF MOLECULAR BIOLOGY
- Convergent and Modular Synthesis of Candidate Precolibactins. Structural Revision of Precolibactin A
- (2016) Alan R. Healy et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Long-timescale dynamics of the Drew–Dickerson dodecamer
- (2016) Pablo D. Dans et al. NUCLEIC ACIDS RESEARCH
- Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma
- (2016) Marios Giannakis et al. Cell Reports
- DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding
- (2015) Tsu-Pei Chiu et al. BIOINFORMATICS
- LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor
- (2015) Nathan C. Sheffield et al. BIOINFORMATICS
- Anthracyclines induce double-strand DNA breaks at active gene promoters
- (2015) Fan Yang et al. MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
- The colibactin warhead crosslinks DNA
- (2015) Maria I. Vizcaino et al. Nature Chemistry
- CTCF/cohesin-binding sites are frequently mutated in cancer
- (2015) Riku Katainen et al. NATURE GENETICS
- Parmbsc1: a refined force field for DNA simulations
- (2015) Ivan Ivani et al. NATURE METHODS
- The UCSC Genome Browser database: 2016 update
- (2015) Matthew L. Speir et al. NUCLEIC ACIDS RESEARCH
- Bacterial genotoxin colibactin promotes colon tumour growth by inducing a senescence-associated secretory phenotype
- (2014) Antony Cougnoux et al. GUT
- Mechanical properties of symmetric and asymmetric DNA A-tracts: implications for looping and nucleosome positioning
- (2014) T. Dr ata et al. NUCLEIC ACIDS RESEARCH
- DNA repair mechanisms in dividing and non-dividing cells
- (2013) Teruaki Iyama et al. DNA REPAIR
- PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
- (2013) Daniel R. Roe et al. Journal of Chemical Theory and Computation
- Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
- (2013) Kristian Cibulskis et al. NATURE BIOTECHNOLOGY
- High Prevalence of Mucosa-Associated E. coli Producing Cyclomodulin and Genotoxin in Colon Cancer
- (2013) Emmanuel Buc et al. PLoS One
- Intestinal Inflammation Targets Cancer-Inducing Activity of the Microbiota
- (2012) J. C. Arthur et al. SCIENCE
- Controls of Nucleosome Positioning in the Human Genome
- (2012) Daniel J. Gaffney et al. PLoS Genetics
- DREME: motif discovery in transcription factor ChIP-seq data
- (2011) Timothy L. Bailey BIOINFORMATICS
- Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma
- (2011) M. Castellarin et al. GENOME RESEARCH
- Translesion Synthesis across Abasic Lesions by Human B-Family and Y-Family DNA Polymerases α, δ, η, ι, κ, and REV1
- (2010) Jeong-Yun Choi et al. JOURNAL OF MOLECULAR BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Genetic Structure and Distribution of the Colibactin Genomic Island among Members of the Family Enterobacteriaceae
- (2009) J. Putze et al. INFECTION AND IMMUNITY
- Bacterial competition: surviving and thriving in the microbial jungle
- (2009) Michael E. Hibbing et al. NATURE REVIEWS MICROBIOLOGY
- Platinum Resistance: The Role of DNA Repair Pathways
- (2008) L. P. Martin et al. CLINICAL CANCER RESEARCH
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