Robust Prediction of Single and Multiple Point Protein Mutations Stability Changes

Data kit inversion and uncertainty analysis

(2019) Zulima Fernández-Muñiz et al.   JOURNAL OF APPLIED GEOPHYSICS

Predicting the Effect of Single and Multiple Mutations on Protein Structural Stability

(2018) Ramin Dehghanpoor et al.   MOLECULES

DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability

(2018) Carlos HM Rodrigues et al.   NUCLEIC ACIDS RESEARCH

The uncertainty analysis in linear and nonlinear regression revisited: application to concrete strength estimation

(2018) Fernández-Martínez Juan Luis et al.   INVERSE PROBLEMS IN SCIENCE AND ENGINEERING

PhosPred-RF: A Novel Sequence-Based Predictor for Phosphorylation Sites Using Sequential Information Only

(2017) Leyi Wei et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

Fast prediction of protein methylation sites using a sequence-based feature selection technique

(2017) Leyi Wei et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

SDM: a server for predicting effects of mutations on protein stability

(2017) Arun Prasad Pandurangan et al.   NUCLEIC ACIDS RESEARCH

HPSLPred: An Ensemble Multi-Label Classifier for Human Protein Subcellular Location Prediction with Imbalanced Source

(2017) Shixiang Wan et al.   PROTEOMICS

ELASPIC web-server: proteome-wide structure-based prediction of mutation effects on protein stability and binding affinity

(2016) Daniel K. Witvliet et al.   BIOINFORMATICS

Quantifying and understanding the fitness effects of protein mutations: Laboratory versus nature

(2016) Jeffrey I. Boucher et al.   PROTEIN SCIENCE

ENCoM server: exploring protein conformational space and the effect of mutations on protein function and stability

(2015) Vincent Frappier et al.   NUCLEIC ACIDS RESEARCH

Predicting the Effect of Mutations on Protein-Protein Binding Interactions through Structure-Based Interface Profiles

(2015) Jeffrey R. Brender et al.   PLoS Computational Biology

Structure Based Thermostability Prediction Models for Protein Single Point Mutations with Machine Learning Tools

(2015) Lei Jia et al.   PLoS One

PredictSNP: Robust and Accurate Consensus Classifier for Prediction of Disease-Related Mutations

(2014) Jaroslav Bendl et al.   PLoS Computational Biology

mCSM: predicting the effects of mutations in proteins using graph-based signatures

(2013) Douglas E. V. Pires et al.   BIOINFORMATICS

PROTS-RF: A Robust Model for Predicting Mutation-Induced Protein Stability Changes

(2012) Yunqi Li et al.   PLoS One

USING RIGIDITY ANALYSIS TO PROBE MUTATION-INDUCED STRUCTURAL CHANGES IN PROTEINS

(2012) FILIP JAGODZINSKI et al.   Journal of Bioinformatics and Computational Biology

COMPUTER-AIDED PROTEIN DIRECTED EVOLUTION: A REVIEW OF WEB SERVERS, DATABASES AND OTHER COMPUTATIONAL TOOLS FOR PROTEIN ENGINEERING

(2012) Rajni Verma et al.   Computational and Structural Biotechnology Journal

Protein stability: a single recorded mutation aids in predicting the effects of other mutations in the same amino acid site

(2011) Gilad Wainreb et al.   BIOINFORMATICS

KINARI-Web: a server for protein rigidity analysis

(2011) N. Fox et al.   NUCLEIC ACIDS RESEARCH

SDM--a server for predicting effects of mutations on protein stability and malfunction

(2011) C. L. Worth et al.   NUCLEIC ACIDS RESEARCH

Prots: A fragment based protein thermo-stability potential

(2011) Yunqi Li et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0

(2009) Yves Dehouck et al.   BIOINFORMATICS

Exploiting the Link between Protein Rigidity and Thermostability for Data-Driven Protein Engineering

(2008) S. Radestock et al.   ENGINEERING IN LIFE SCIENCES

Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction

(2002) Hongyi Zhou et al.   PROTEIN SCIENCE