Deciphering the Rules Underlying Xenogeneic Silencing and Counter-Silencing of Lsr2-like Proteins Using CgpS of Corynebacterium glutamicum as a Model

Impact of Xenogeneic Silencing on Phage–Host Interactions

(2019) Eugen Pfeifer et al.   JOURNAL OF MOLECULAR BIOLOGY

Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2

(2019) Emma J Gehrke et al.   eLife

Systematic discovery of antiphage defense systems in the microbial pangenome

(2018) Shany Doron et al.   SCIENCE

A single molecule analysis of H-NS uncouples DNA binding affinity from DNA specificity

(2018) Ranjit Gulvady et al.   NUCLEIC ACIDS RESEARCH

How bacterial xenogeneic silencer rok distinguishes foreign from self DNA in its resident genome

(2018) Bo Duan et al.   NUCLEIC ACIDS RESEARCH

Horizontally acquired AT-rich genes in Escherichia coli cause toxicity by sequestering RNA polymerase

(2017) Lisa E. Lamberte et al.   Nature Microbiology

A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome

(2016) Laurence Ettwiller et al.   BMC GENOMICS

Silencing of cryptic prophages inCorynebacterium glutamicum

(2016) Eugen Pfeifer et al.   NUCLEIC ACIDS RESEARCH

Integrated circuits: how transcriptional silencing and counter-silencing facilitate bacterial evolution

(2015) W Ryan Will et al.   CURRENT OPINION IN MICROBIOLOGY

H-NS and RNA polymerase: a love–hate relationship?

(2015) Robert Landick et al.   CURRENT OPINION IN MICROBIOLOGY

Spatiotemporal microbial single-cell analysis using a high-throughput microfluidics cultivation platform

(2015) Alexander Grünberger et al.   CYTOMETRY PART A

The mycobacterial iron-dependent regulator IdeR induces ferritin (bfrB) by alleviating Lsr2 repression

(2015) Krishna Kurthkoti et al.   MOLECULAR MICROBIOLOGY

A Novel AT-Rich DNA Recognition Mechanism for Bacterial Xenogeneic Silencer MvaT

(2015) Pengfei Ding et al.   PLoS Pathogens

H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria

(2014) Charles J. Dorman   PLASMID

The Influence of Promoter Architectures and Regulatory Motifs on Gene Expression in Escherichia coli

(2014) Mattias Rydenfelt et al.   PLoS One

Evolutionary expansion of a regulatory network by counter-silencing

(2014) W. Ryan Will et al.   Nature Communications

CRISPR-Mediated Adaptive Immune Systems in Bacteria and Archaea

(2013) Rotem Sorek et al.   Annual Review of Biochemistry

Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique

(2013) Katharina Pfeifer-Sancar et al.   BMC GENOMICS

Exploring the costs of horizontal gene transfer

(2013) David A. Baltrus   TRENDS IN ECOLOGY & EVOLUTION

Activating Transcription in Bacteria

(2012) David J. Lee et al.   Annual Review of Microbiology

High Expression Hampers Horizontal Gene Transfer

(2012) Chungoo Park et al.   Genome Biology and Evolution

A disposable picolitre bioreactor for cultivation and investigation of industrially relevant bacteria on the single cell level

(2012) Alexander Grünberger et al.   LAB ON A CHIP

The promoter architectural landscape of the Salmonella PhoP regulon

(2012) Igor Zwir et al.   MOLECULAR MICROBIOLOGY

LeuO is a global regulator of gene expression inSalmonella entericaserovar Typhimurium

(2012) Shane C. Dillon et al.   MOLECULAR MICROBIOLOGY

Higher order oligomerization is required for H-NS family member MvaT to form gene-silencing nucleoprotein filament

(2012) Ricksen S. Winardhi et al.   NUCLEIC ACIDS RESEARCH

Nucleoprotein filament formation is the structural basis for bacterial protein H-NS gene silencing

(2012) Ci Ji Lim et al.   Scientific Reports

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

The advantages and disadvantages of horizontal gene transfer and the emergence of the first species

(2011) Aaron A Vogan et al.   Biology Direct

Mechanism of transcriptional repression at a bacterial promoter by analysis of single molecules

(2011) Alvaro Sanchez et al.   EMBO JOURNAL

Rational Design of an Artificial Genetic Switch: Co-Option of the H-NS-Repressed proU Operon by the VirB Virulence Master Regulator

(2011) K. A. Kane et al.   JOURNAL OF BACTERIOLOGY

Novel roles of LeuO in transcription regulation of E. coli genome: antagonistic interplay with the universal silencer H-NS

(2011) Tomohiro Shimada et al.   MOLECULAR MICROBIOLOGY

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

(2011) B. R. G. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-order oligomerization is required for the function of the H-NS family member MvaT in Pseudomonas aeruginosa

(2010) Sandra Castang et al.   MOLECULAR MICROBIOLOGY

Bacteriophage resistance mechanisms

(2010) Simon J. Labrie et al.   NATURE REVIEWS MICROBIOLOGY

Lsr2 is a nucleoid-associated protein that targets AT-rich sequences and virulence genes in Mycobacterium tuberculosis

(2010) B. R. G. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evidence of Selection upon Genomic GC-Content in Bacteria

(2010) Falk Hildebrand et al.   PLoS Genetics

The Transcriptional Regulator Rok Binds A+T-Rich DNA and Is Involved in Repression of a Mobile Genetic Element in Bacillus subtilis

(2010) Wiep Klaas Smits et al.   PLoS Genetics

Validation of a high-throughput fermentation system based on online monitoring of biomass and fluorescence in continuously shaken microtiter plates

(2009) Frank Kensy et al.   Microbial Cell Factories

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

The multifunctional histone-like protein Lsr2 protects mycobacteria against reactive oxygen intermediates

(2009) R. Colangeli et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lsr2 of Mycobacterium Represents a Novel Class of H-NS-Like Proteins

(2008) B. R. G. Gordon et al.   JOURNAL OF BACTERIOLOGY

Lsr2 of Mycobacterium tuberculosis is a DNA-bridging protein

(2008) Jeffrey M. Chen et al.   NUCLEIC ACIDS RESEARCH