A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome
Authors
Keywords
Transcriptome, Transcription start sites, Microbiome
Journal
BMC GENOMICS
Volume 17, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-03-08
DOI
10.1186/s12864-016-2539-z
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Leaderless Transcripts and Small Proteins Are Common Features of the Mycobacterial Translational Landscape
- (2015) Scarlet S. Shell et al. PLoS Genetics
- Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis
- (2014) Dominik Jäger et al. BMC GENOMICS
- Differential RNA-seq: the approach behind and the biological insight gained
- (2014) Cynthia M Sharma et al. CURRENT OPINION IN MICROBIOLOGY
- RNA Sequencing and Proteogenomics Reveal the Importance of Leaderless mRNAs in the Radiation-Tolerant Bacterium Deinococcus deserti
- (2014) Arjan de Groot et al. Genome Biology and Evolution
- Global Transcriptional Start Site Mapping Using Differential RNA Sequencing Reveals Novel Antisense RNAs in Escherichia coli
- (2014) Maureen K. Thomason et al. JOURNAL OF BACTERIOLOGY
- A comparison of key aspects of gene regulation inStreptomyces coelicolorandEscherichia coliusing nucleotide-resolution transcription maps produced in parallel by global and differential RNA sequencing
- (2014) David A. Romero et al. MOLECULAR MICROBIOLOGY
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- CapSeq and CIP-TAP Identify Pol II Start Sites and Reveal Capped Small RNAs as C. elegans piRNA Precursors
- (2012) Weifeng Gu et al. CELL
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more
- (2012) Heladia Salgado et al. NUCLEIC ACIDS RESEARCH
- An Improved Protection-Free One-Pot Chemical Synthesis of 2′-Deoxynucleoside-5′-Triphosphates
- (2012) Anilkumar R. Kore et al. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS
- The Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase
- (2012) P. Zhelyazkova et al. PLANT CELL
- Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
- (2012) Georgia Giannoukos et al. GENOME BIOLOGY
- Leaderless genes in bacteria: clue to the evolution of translation initiation mechanisms in prokaryotes
- (2011) Xiaobin Zheng et al. BMC GENOMICS
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- The UCSC Archaeal Genome Browser: 2012 update
- (2011) P. P. Chan et al. NUCLEIC ACIDS RESEARCH
- The primary transcriptome of the major human pathogen Helicobacter pylori
- (2010) Cynthia M. Sharma et al. NATURE
- Nucleosome rotational setting is associated with transcriptional regulation in promoters of tissue-specific human genes
- (2010) Charles Hebert et al. GENOME BIOLOGY
- Analysis and Optimization of Copper-Catalyzed AzideâAlkyne Cycloaddition for Bioconjugation
- (2009) Vu Hong et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- MEME SUITE: tools for motif discovery and searching
- (2009) T. L. Bailey et al. NUCLEIC ACIDS RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search