Quantitative Framework for Model Evaluation in Microbiology Research Using Pseudomonas aeruginosa and Cystic Fibrosis Infection as a Test Case
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Title
Quantitative Framework for Model Evaluation in Microbiology Research Using Pseudomonas aeruginosa and Cystic Fibrosis Infection as a Test Case
Authors
Keywords
-
Journal
mBio
Volume 11, Issue 1, Pages -
Publisher
American Society for Microbiology
Online
2020-01-13
DOI
10.1128/mbio.03042-19
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Note: Only part of the references are listed.- Animal Models in the Pathophysiology of Cystic Fibrosis
- (2019) Anna Semaniakou et al. Frontiers in Pharmacology
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- (2018) Sophie E. Darch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2018) Daniel M. Cornforth et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2018) Alexander S. Little et al. mBio
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- (2018) Elio Rossi et al. Nature Communications
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- (2018) Megan R. Kiedrowski et al. mSphere
- Genomic and phenotypic diversity among ten laboratory isolates of Pseudomonas aeruginosa PAO1
- (2018) Courtney E. Chandler et al. JOURNAL OF BACTERIOLOGY
- Aureo Wiki ̵ The repository of the Staphylococcus aureus research and annotation community
- (2017) Stephan Fuchs et al. INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY
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- (2017) Didac Santesmasses et al. PLoS Computational Biology
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- (2017) Jeffrey A. Melvin et al. mSphere
- Digging through the Obstruction: Insight into the Epithelial Cell Response to Respiratory Virus Infection in Patients with Cystic Fibrosis
- (2016) Matthew R. Hendricks et al. JOURNAL OF VIROLOGY
- Respiratory syncytial virus infection enhancesPseudomonas aeruginosabiofilm growth through dysregulation of nutritional immunity
- (2016) Matthew R. Hendricks et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Airway acidification initiates host defense abnormalities in cystic fibrosis mice
- (2016) V. S. Shah et al. SCIENCE
- Dual-seq transcriptomics reveals the battle for iron during Pseudomonas aeruginosa acute murine pneumonia
- (2016) F. Heath Damron et al. Scientific Reports
- A murine model of early Pseudomonas aeruginosa lung disease with transition to chronic infection
- (2016) H. K. Bayes et al. Scientific Reports
- CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers
- (2015) Rachid Ounit et al. BMC GENOMICS
- Current and Past Strategies for Bacterial Culture in Clinical Microbiology
- (2015) Jean-Christophe Lagier et al. CLINICAL MICROBIOLOGY REVIEWS
- Essential genome ofPseudomonas aeruginosain cystic fibrosis sputum
- (2015) Keith H. Turner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Recombination is a key driver of genomic and phenotypic diversity in a Pseudomonas aeruginosa population during cystic fibrosis infection
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- (2015) Laura M. Filkins et al. PLoS Pathogens
- Mechanisms of synergy in polymicrobial infections
- (2014) Justine L. Murray et al. JOURNAL OF MICROBIOLOGY
- Requirements for Pseudomonas aeruginosa Acute Burn and Chronic Surgical Wound Infection
- (2014) Keith H. Turner et al. PLoS Genetics
- Sequence-Verified Two-Allele Transposon Mutant Library for Pseudomonas aeruginosa PAO1
- (2012) Kiara Held et al. JOURNAL OF BACTERIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Decade-long bacterial community dynamics in cystic fibrosis airways
- (2012) J. Zhao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Characterization of Alanine Catabolism in Pseudomonas aeruginosa and Its Importance for Proliferation In Vivo
- (2009) M. L. Boulette et al. JOURNAL OF BACTERIOLOGY
- Genome Diversity of Pseudomonas aeruginosa PAO1 Laboratory Strains
- (2009) J. Klockgether et al. JOURNAL OF BACTERIOLOGY
- The ΔF508-CFTR mutation results in increased biofilm formation by Pseudomonas aeruginosa by increasing iron availability
- (2008) Sophie Moreau-Marquis et al. AMERICAN JOURNAL OF PHYSIOLOGY-LUNG CELLULAR AND MOLECULAR PHYSIOLOGY
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