Common structuring principles of the Drosophila melanogaster microbiome on a continental scale and between host and substrate

Neutrality in the Metaorganism

(2019) Michael Sieber et al.   PLOS BIOLOGY

Host determinants of among-species variation in microbiome composition in drosophilid flies

(2019) Karen L. Adair et al.   ISME Journal

Consequences of chronic bacterial infection in Drosophila melanogaster

(2019) Moria Cairns Chambers et al.   PLoS One

The microbiota influences the Drosophila melanogaster life history strategy

(2019) Amber W. Walters et al.   MOLECULAR ECOLOGY

Drosophila Perpetuates Nutritional Mutualism by Promoting the Fitness of Its Intestinal Symbiont Lactobacillus plantarum

(2018) Gilles Storelli et al.   Cell Metabolism

Microbial community assembly in wild populations of the fruit fly Drosophila melanogaster

(2018) Karen L. Adair et al.   ISME Journal

Functional variation in the gut microbiome of wild Drosophila populations

(2018) Alyssa Bost et al.   MOLECULAR ECOLOGY

Rapid seasonal evolution in innate immunity of wild Drosophila melanogaster

(2018) Emily L. Behrman et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Spatiotemporally Heterogeneous Population Dynamics of Gut Bacteria Inferred from Fecal Time Series Data

(2018) Hidetoshi Inamine et al.   mBio

Drosophila melanogaster establishes a species-specific mutualistic interaction with stable gut-colonizing bacteria

(2018) Inês S. Pais et al.   PLOS BIOLOGY

Environment dominates over host genetics in shaping human gut microbiota

(2018) Daphna Rothschild et al.   NATURE

Microbiomes as Metacommunities: Understanding Host-Associated Microbes through Metacommunity Ecology

(2018) Elizabeth Theresa Miller et al.   TRENDS IN ECOLOGY & EVOLUTION

Host diet mediates a negative relationship between abundance and diversity of Drosophila gut microbiota

(2018) Berra Erkosar et al.   Ecology and Evolution

WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas

(2017) Stephen E. Fick et al.   INTERNATIONAL JOURNAL OF CLIMATOLOGY

The evolution of the host microbiome as an ecosystem on a leash

(2017) Kevin R. Foster et al.   NATURE

A communal catalogue reveals Earth’s multiscale microbial diversity

(2017) Luke R. Thompson et al.   NATURE

Stochastic variation in the initial phase of bacterial infection predicts the probability of survival in D. melanogaster

(2017) David Duneau et al.   eLife

Differential Ecological Specificity of Protist and Bacterial Microbiomes across a Set of Termite Species

(2017) Lena Waidele et al.   Frontiers in Microbiology

Temperature mediates continental-scale diversity of microbes in forest soils

(2016) Jizhong Zhou et al.   Nature Communications

Host Genetic Control of the Microbiota Mediates the Drosophila Nutritional Phenotype

(2015) John M. Chaston et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Host as the Driver of the Microbiota in the Gut and External Environment of Drosophila melanogaster

(2015) Adam C.-N. Wong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rethinking heritability of the microbiome

(2015) Edward J. van Opstal et al.   SCIENCE

The Complex Contributions of Genetics and Nutrition to Immunity in Drosophila melanogaster

(2015) Robert L. Unckless et al.   PLoS Genetics

Thorax Injury Lowers Resistance to Infection in Drosophila melanogaster

(2014) Moria C. Chambers et al.   INFECTION AND IMMUNITY

Dietary history contributes to enterotype-like clustering and functional metagenomic content in the intestinal microbiome of wild mice

(2014) Jun Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Noninvasive Analysis of Microbiome Dynamics in the Fruit Fly Drosophila melanogaster

(2013) Christine Fink et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The inconstant gut microbiota of Drosophila species revealed by 16S rRNA gene analysis

(2013) Adam C-N Wong et al.   ISME Journal

Host Species and Environmental Effects on Bacterial Communities Associated with Drosophila in the Laboratory and in the Natural Environment

(2013) Fabian Staubach et al.   PLoS One

Frequent Replenishment Sustains the Beneficial Microbiome of Drosophila melanogaster

(2013) J. E. Blum et al.   mBio

Comparative pathology of bacteria in the genus Providencia to a natural host, Drosophila melanogaster

(2011) Madeline R. Galac et al.   MICROBES AND INFECTION

Unravelling the effects of the environment and host genotype on the gut microbiome

(2011) Aymé Spor et al.   NATURE REVIEWS MICROBIOLOGY

Genetic evidence for a protective role of the peritrophic matrix against intestinal bacterial infection in Drosophila melanogaster

(2011) T. Kuraishi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Drosophila Microbiome Modulates Host Developmental and Metabolic Homeostasis via Insulin Signaling

(2011) S. C. Shin et al.   SCIENCE

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Bacterial Communities of Diverse Drosophila Species: Ecological Context of a Host–Microbe Model System

(2011) James Angus Chandler et al.   PLoS Genetics

On the Utility of Short Intron Sequences as a Reference for the Detection of Positive and Negative Selection in Drosophila

(2010) J. Parsch et al.   MOLECULAR BIOLOGY AND EVOLUTION

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic Characterization of Two Novel Commensal Bacteria Involved with Innate Immune Homeostasis in Drosophila melanogaster

(2008) S. W. Roh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Host ecology shapes geographical variation for resistance to bacterial infection in Drosophila melanogaster

(2008) Vanessa Corby-Harris et al.   JOURNAL OF ANIMAL ECOLOGY

Innate Immune Homeostasis by the Homeobox Gene Caudal and Commensal-Gut Mutualism in Drosophila

(2008) J.-H. Ryu et al.   SCIENCE

Genotype-by-Environment Interactions and Adaptation to Local Temperature Affect Immunity and Fecundity in Drosophila melanogaster

(2008) Brian P. Lazzaro et al.   PLoS Pathogens