Functional variants of DOG1 control seed chilling responses and variation in seasonal life-history strategies in Arabidopsis thaliana

On the post-glacial spread of human commensal Arabidopsis thaliana : journey to the east

(2019) Che-Wei Hsu et al.   NEW PHYTOLOGIST

Pleiotropy in developmental regulation by flowering‐pathway genes: is it an evolutionary constraint?

(2019) Gabriela A. Auge et al.   NEW PHYTOLOGIST

An ecological history of the relict genetic lineage of Arabidopsis thaliana

(2019) Bernardo Toledo et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Germination timing and chilling exposure create contingency in life history and influence fitness in the native wildflower Streptanthus tortuosus

(2019) Jennifer R. Gremer et al.   JOURNAL OF ECOLOGY

Genome-wide signatures of flowering adaptation to climate temperature: Regional analyses in a highly diverse native range of Arabidopsis thaliana

(2018) Daniel Tabas-Madrid et al.   PLANT CELL AND ENVIRONMENT

Layers of regulation – Insights into the role of transcription factors controlling mucilage production in the Arabidopsis seed coat

(2018) John F. Golz et al.   PLANT SCIENCE

Combining population genomics and fitness QTLs to identify the genetics of local adaptation inArabidopsis thaliana

(2018) Nicholas Price et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic signals of selection predict climate-driven population declines in a migratory bird

(2018) Rachael A. Bay et al.   SCIENCE

The rate and potential relevance of new mutations in a colonizing plant lineage

(2018) Moises Exposito-Alonso et al.   PLoS Genetics

Linking genes with ecological strategies in A rabidopsis thaliana

(2018) Margarita Takou et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Polygenic Genetic Architecture of Flowering Time in the Worldwide Arabidopsis thaliana Population

(2018) Yanjun Zan et al.   MOLECULAR BIOLOGY AND EVOLUTION

Seed dormancy cycling and the regulation of dormancy mechanisms to time germination in variable field environments

(2017) William E. Finch-Savage et al.   JOURNAL OF EXPERIMENTAL BOTANY

Interacting effects of genetic variation for seed dormancy and flowering time on phenology, life history, and fitness of experimental Arabidopsis thaliana populations over multiple generations in the field

(2017) Mark A. Taylor et al.   NEW PHYTOLOGIST

The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog

(2017) Matteo Togninalli et al.   NUCLEIC ACIDS RESEARCH

Temperature fine-tunes Mediterranean Arabidopsis thaliana life-cycle phenology geographically

(2017) A. Marcer et al.   PLANT BIOLOGY

African genomes illuminate the early history and transition to selfing inArabidopsis thaliana

(2017) Arun Durvasula et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DELAY OF GERMINATION1 requires PP2C phosphatases of the ABA signalling pathway to control seed dormancy

(2017) Guillaume Née et al.   Nature Communications

On the post-glacial spread of human commensal Arabidopsis thaliana

(2017) Cheng-Ruei Lee et al.   Nature Communications

Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana

(2017) Moises Exposito-Alonso et al.   Nature Ecology & Evolution

A cline in seed dormancy helps conserve the environment experienced during reproduction across the range of Arabidopsis thaliana

(2016) L. T. Burghardt et al.   AMERICAN JOURNAL OF BOTANY

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

(2016) Carlos Alonso-Blanco et al.   CELL

Within-and among-year germination in Sonoran Desert winter annuals: bet hedging and predictive germination in a variable environment

(2016) Jennifer R. Gremer et al.   ECOLOGY LETTERS

Altitudinal and climatic associations of seed dormancy and flowering traits evidence adaptation of annual life cycle timing inArabidopsis thaliana

(2016) Deborah S. Vidigal et al.   PLANT CELL AND ENVIRONMENT

Rapid identification of lettuce seed germination mutants by bulked segregant analysis and whole genome sequencing

(2016) Heqiang Huo et al.   PLANT JOURNAL

Control of seed dormancy inArabidopsisby acis-acting noncoding antisense transcript

(2016) Halina Fedak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DELAY OF GERMINATION1(DOG1) regulates both seed dormancy and flowering time through microRNA pathways

(2016) Heqiang Huo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Early life stages contribute strongly to local adaptation inArabidopsis thaliana

(2016) Froukje M. Postma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple alleles at a single locus control seed dormancy in Swedish Arabidopsis

(2016) Envel Kerdaffrec et al.   eLife

Modeling the Influence of Genetic and Environmental Variation on the Expression of Plant Life Cycles across Landscapes

(2015) Liana T. Burghardt et al.   AMERICAN NATURALIST

Maternal environment affects the genetic basis of seed dormancy inArabidopsis thaliana

(2015) Froukje M. Postma et al.   MOLECULAR ECOLOGY

Multiple paths to similar germination behavior inArabidopsis thaliana

(2015) Liana T. Burghardt et al.   NEW PHYTOLOGIST

FLOR-ID: an interactive database of flowering-time gene networks inArabidopsis thaliana

(2015) Frédéric Bouché et al.   NUCLEIC ACIDS RESEARCH

Secondary dormancy dynamics depends on primary dormancy status in Arabidopsis thaliana

(2015) Gabriela A. Auge et al.   SEED SCIENCE RESEARCH

Century-scale Methylome Stability in a Recently Diverged Arabidopsis thaliana Lineage

(2015) Jörg Hagmann et al.   PLoS Genetics

Seed Dormancy in Arabidopsis Requires Self-Binding Ability of DOG1 Protein and the Presence of Multiple Isoforms Generated by Alternative Splicing

(2015) Kazumi Nakabayashi et al.   PLoS Genetics

Seasonal shift in timing of vernalization as an adaptation to extreme winter

(2015) Susan Duncan et al.   eLife

Bet hedging in desert winter annual plants: optimal germination strategies in a variable environment

(2014) Jennifer R. Gremer et al.   ECOLOGY LETTERS

Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation

(2014) Matthew C. Fitzpatrick et al.   ECOLOGY LETTERS

Interaction between parental environment and genotype affects plant and seed performance in Arabidopsis

(2014) Hanzi He et al.   JOURNAL OF EXPERIMENTAL BOTANY

Seed dispersal in time can counteract the effect of gene flow between natural populations ofArabidopsis thaliana

(2014) Mohsen Falahati-Anbaran et al.   NEW PHYTOLOGIST

Environment sensing in spring-dispersed seeds of a winter annual Arabidopsis influences the regulation of dormancy to align germination potential with seasonal changes

(2014) Steven Footitt et al.   NEW PHYTOLOGIST

Maternal temperature history activates Flowering Locus T in fruits to control progeny dormancy according to time of year

(2014) Min Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination

(2014) K. Graeber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Temperature, light and nitrate sensing coordinate Arabidopsis seed dormancy cycling, resulting in winter and summer annual phenotypes

(2013) Steven Footitt et al.   PLANT JOURNAL

Co-Variation between Seed Dormancy, Growth Rate and Flowering Time Changes with Latitude in Arabidopsis thaliana

(2013) Marilyne Debieu et al.   PLoS One

Polygenic Modeling with Bayesian Sparse Linear Mixed Models

(2013) Xiang Zhou et al.   PLoS Genetics

CLINAL VARIATION IN SEED TRAITS INFLUENCING LIFE CYCLE TIMING INARABIDOPSIS THALIANA

(2012) Alicia Montesinos-Navarro et al.   EVOLUTION

GENETIC BASIS OF ADAPTATION IN ARABIDOPSIS THALIANA: LOCAL ADAPTATION AT THE SEED DORMANCY QTL DOG1

(2012) Ilkka Kronholm et al.   EVOLUTION

PLEIOTROPY IN THE WILD: THE DORMANCY GENEDOG1EXERTS CASCADING CONTROL ON LIFE CYCLES

(2012) George C. K. Chiang et al.   EVOLUTION

Demographic fate ofArabidopsis thalianacohorts of autumn- and spring-germinated plants along an altitudinal gradient

(2012) F. Xavier Picó   JOURNAL OF ECOLOGY

The Time Required for Dormancy Release in Arabidopsis Is Determined by DELAY OF GERMINATION1 Protein Levels in Freshly Harvested Seeds

(2012) K. Nakabayashi et al.   PLANT CELL

Maternal and zygotic temperature signalling in the control of seed dormancy and germination

(2012) Sarah Kendall et al.   SEED SCIENCE RESEARCH

Members of the gibberellin receptor gene family GID1 (GIBBERELLIN INSENSITIVE DWARF1) play distinct roles during Lepidium sativum and Arabidopsis thaliana seed germination

(2011) Antje Voegele et al.   JOURNAL OF EXPERIMENTAL BOTANY

DOG1 expression is predicted by the seed-maturation environment and contributes to geographical variation in germination in Arabidopsis thaliana

(2011) GEORGE C. K. CHIANG et al.   MOLECULAR ECOLOGY

Understanding chilling responses in Arabidopsis seeds and their contribution to life history

(2011) S. Penfield et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Induction of Dormancy in Arabidopsis Summer Annuals Requires Parallel Regulation of DOG1 and Hormone Metabolism by Low Temperature and CBF Transcription Factors

(2011) S. L. Kendall et al.   PLANT CELL

Source verification of mis-identified Arabidopsis thaliana accessions

(2011) Alison E. Anastasio et al.   PLANT JOURNAL

Dormancy cycling in Arabidopsis seeds is controlled by seasonally distinct hormone-signaling pathways

(2011) S. Footitt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Map of Local Adaptation in Arabidopsis thaliana

(2011) A. Fournier-Level et al.   SCIENCE

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

The earliest stages of adaptation in an experimental plant population: strong selection on QTLS for seed dormancy

(2010) XUEQING HUANG et al.   MOLECULAR ECOLOGY

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

(2010) Susanna Atwell et al.   NATURE

Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana

(2010) Y. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

Ethylene Interacts with Abscisic Acid to Regulate Endosperm Rupture during Germination: A Comparative Approach Using Lepidium sativum and Arabidopsis thaliana

(2009) A. Linkies et al.   PLANT CELL

Effects of Genetic Perturbation on Seasonal Life History Plasticity

(2009) A. M. Wilczek et al.   SCIENCE

Demographic History of European Populations of Arabidopsis thaliana

(2008) Olivier François et al.   PLoS Genetics