Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation

Ecological genomics and process modeling of local adaptation to climate

(2014) Cynthia Weinig et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome scan methods against more complex models: when and how much should we trust them?

(2014) Pierre de Villemereuil et al.   MOLECULAR ECOLOGY

Phylogenetic generalised dissimilarity modelling: a new approach to analysing and predicting spatial turnover in the phylogenetic composition of communities

(2013) Dan F. Rosauer et al.   ECOGRAPHY

INTEGRATING LANDSCAPE GENOMICS AND SPATIALLY EXPLICIT APPROACHES TO DETECT LOCI UNDER SELECTION IN CLINAL POPULATIONS

(2013) Matthew R. Jones et al.   EVOLUTION

Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models

(2013) Eric Frichot et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genotyping-by-sequencing in ecological and conservation genomics

(2013) Shawn R. Narum et al.   MOLECULAR ECOLOGY

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

Regional Differences in Seasonal Timing of Rainfall Discriminate between Genetically Distinct East African Giraffe Taxa

(2013) Henri A. Thomassen et al.   PLoS One

Environmental and historical imprints on beta diversity: insights from variation in rates of species turnover along gradients

(2013) M. C. Fitzpatrick et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Putting the landscape into the genomics of trees: approaches for understanding local adaptation and population responses to changing climate

(2013) V. L. Sork et al.   Tree Genetics & Genomes

Genetic diversity in caribou linked to past and future climate change

(2013) Glenn Yannic et al.   Nature Climate Change

Predicting Adaptive Phenotypes From Multilocus Genotypes in Sitka Spruce ( Picea sitchensis ) Using Random Forest

(2013) Jason A. Holliday et al.   G3-Genes Genomes Genetics

Adaptive Genetic Variation on the Landscape: Methods and Cases

(2012) Sean D. Schoville et al.   Annual Review of Ecology Evolution and Systematics

Climate envelope modelling reveals intraspecific relationships among flowering phenology, niche breadth and potential range size inArabidopsis thaliana

(2012) Joshua A. Banta et al.   ECOLOGY LETTERS

Predicting present and future intra-specific genetic structure through niche hindcasting across 24 millennia

(2012) Anahí Espíndola et al.   ECOLOGY LETTERS

Conservation of phylogeographic lineages under climate change

(2012) Manuela D’Amen et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Exploring the role of environmental variables in shaping patterns of seabed biodiversity composition in regional-scale ecosystems

(2012) C. Roland Pitcher et al.   JOURNAL OF APPLIED ECOLOGY

Biophysical patterns in benthic assemblage composition across contrasting continental margins off New Zealand

(2012) Tanya J. Compton et al.   JOURNAL OF BIOGEOGRAPHY

Local Adaptation in the Flowering-Time Gene Network of Balsam Poplar, Populus balsamifera L.

(2012) S. R. Keller et al.   MOLECULAR BIOLOGY AND EVOLUTION

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

(2012) STÉPHANIE MANEL et al.   MOLECULAR ECOLOGY

The impact of global climate change on genetic diversity within populations and species

(2012) Steffen U. Pauls et al.   MOLECULAR ECOLOGY

The adaptive potential ofPopulus balsamiferaL. to phenology requirements in a warmer global climate

(2012) Matthew S. Olson et al.   MOLECULAR ECOLOGY

Characterizing genomic variation ofArabidopsis thaliana: the roles of geography and climate

(2012) JESSE R. LASKY et al.   MOLECULAR ECOLOGY

Forecasting changes in population genetic structure of alpine plants in response to global warming

(2012) FLORA JAY et al.   MOLECULAR ECOLOGY

Forecasting the future of biodiversity: a test of single- and multi-species models for ants in North America

(2011) Matthew C. Fitzpatrick et al.   ECOGRAPHY

Gradient forests: calculating importance gradients on physical predictors

(2011) Nick Ellis et al.   ECOLOGY

Local Selection Across a Latitudinal Gradient Shapes Nucleotide Diversity in Balsam Poplar,Populus balsamiferaL

(2011) Stephen R. Keller et al.   GENETICS

Joint analysis of demography and selection in population genetics: where do we stand and where could we go?

(2011) JUNRUI LI et al.   MOLECULAR ECOLOGY

Comparison ofFSToutlier tests for SNP loci under selection

(2011) SHAWN R. NARUM et al.   Molecular Ecology Resources

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Divergent selection and heterogeneous migration rates across the range of Sitka spruce (Picea sitchensis)

(2011) J. A. Holliday et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A Map of Local Adaptation in Arabidopsis thaliana

(2011) A. Fournier-Level et al.   SCIENCE

Adaptation to Climate Across the Arabidopsis thaliana Genome

(2011) A. M. Hancock et al.   SCIENCE

Predictions of beta diversity for reef macroalgae across southeastern Australia

(2011) R. Leaper et al.   Ecosphere

Climate-driven local adaptation of ecophysiology and phenology in balsam poplar, Populus balsamifera L. (Salicaceae)

(2010) Stephen R. Keller et al.   AMERICAN JOURNAL OF BOTANY

Biodiversity and Climate Change: Integrating Evolutionary and Ecological Responses of Species and Communities

(2010) Sébastien Lavergne et al.   Annual Review of Ecology Evolution and Systematics

Within-taxon niche structure: niche conservatism, divergence and predicted effects of climate change

(2010) Peter B. Pearman et al.   ECOGRAPHY

Using Environmental Correlations to Identify Loci Underlying Local Adaptation

(2010) G. Coop et al.   GENETICS

Genomic diversity, population structure, and migration following rapid range expansion in the Balsam Poplar,Populus balsamifera

(2010) STEPHEN R. KELLER et al.   MOLECULAR ECOLOGY

Use of resistance surfaces for landscape genetic studies: considerations for parameterization and analysis

(2010) STEPHEN F. SPEAR et al.   MOLECULAR ECOLOGY

Gene movement and genetic association with regional climate gradients in California valley oak (Quercus lobata Née) in the face of climate change

(2010) VICTORIA L. SORK et al.   MOLECULAR ECOLOGY

Common factors drive adaptive genetic variation at different spatial scales in Arabis alpina

(2010) S. MANEL et al.   MOLECULAR ECOLOGY

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field

(2010) STÉPHANIE MANEL et al.   MOLECULAR ECOLOGY

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae)

(2010) ANDREW J. ECKERT et al.   MOLECULAR ECOLOGY

Bud set in poplar - genetic dissection of a complex trait in natural and hybrid populations

(2010) Antje Rohde et al.   NEW PHYTOLOGIST

Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

(2009) Jane Elith et al.   Annual Review of Ecology Evolution and Systematics

A random forest approach to the detection of epistatic interactions in case-control studies

(2009) Rui Jiang et al.   BMC BIOINFORMATICS

Modeling environmentally associated morphological and genetic variation in a rainforest bird, and its application to conservation prioritization

(2009) Henri A. Thomassen et al.   Evolutionary Applications

Detecting loci under selection in a hierarchically structured population

(2009) L Excoffier et al.   HEREDITY

Local adaptation at the range peripheries of Sitka spruce

(2009) M. MIMURA et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Population Genomics of the Arabidopsis thaliana Flowering Time Gene Network

(2009) J. M. Flowers et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeography’s past, present, and future: 10 years after Avise, 2000

(2009) M.J. Hickerson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Effects of sample size on the performance of species distribution models

(2008) M. S. Wisz et al.   DIVERSITY AND DISTRIBUTIONS

Nucleotide Polymorphism and Phenotypic Associations Within and Around the phytochrome B2 Locus in European Aspen (Populus tremula, Salicaceae)

(2008) P. K. Ingvarsson et al.   GENETICS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

A Meta-Analysis of Local Adaptation in Plants

(2008) Roosa Leimu et al.   PLoS One