Nutritional component analyses of kiwifruit in different development stages by metabolomic and transcriptomic approaches

Formation of taste-active amino acids, amino acid derivatives and peptides in food fermentations – A review

(2016) Cindy J. Zhao et al.   FOOD RESEARCH INTERNATIONAL

Integrated analysis of metabolites and proteins reveal aspects of the tissue-specific function of synthetic cytokinin in kiwifruit development and ripening

(2016) Aggeliki Ainalidou et al.   Journal of Proteomics

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

Coupling of Physiological and Proteomic Analysis to Understand the Ethylene- and Chilling-Induced Kiwifruit Ripening Syndrome

(2016) Ioannis S. Minas et al.   Frontiers in Plant Science

Transcriptomic and Metabolomic Networks in the Grape Berry Illustrate That it Takes More Than Flavonoids to Fight Against Ultraviolet Radiation

(2016) José Tomás Matus   Frontiers in Plant Science

SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data

(2016) Hugo Varet et al.   PLoS One

The impact of sodium nitroprusside and ozone in kiwifruit ripening physiology: a combined gene and protein expression profiling approach

(2015) Georgia Tanou et al.   ANNALS OF BOTANY

Analysis of the Human Adult Urinary Metabolome Variations with Age, Body Mass Index, and Gender by Implementing a Comprehensive Workflow for Univariate and OPLS Statistical Analyses

(2015) Etienne A. Thévenot et al.   JOURNAL OF PROTEOME RESEARCH

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Correction: Gene Expression Profiling of Development and Anthocyanin Accumulation in Kiwifruit (Actinidia chinensis) Based on Transcriptome Sequencing

(2015) Wenbin Li et al.   PLoS One

Principal component analysis

(2014) Rasmus Bro et al.   Analytical Methods

Transcriptome sequencing and metabolite analysis reveals the role of delphinidin metabolism in flower colour in grape hyacinth

(2014) Qian Lou et al.   JOURNAL OF EXPERIMENTAL BOTANY

An integrative analysis of the transcriptome and proteome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus

(2014) Juxun Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

l-Ascorbic acid metabolism during fruit development in an ascorbate-rich fruit crop chestnut rose (Rosa roxburghii Tratt)

(2014) Ming Huang et al.   JOURNAL OF PLANT PHYSIOLOGY

Ozone-induced kiwifruit ripening delay is mediated by ethylene biosynthesis inhibition and cell wall dismantling regulation

(2014) Ioannis S. Minas et al.   PLANT SCIENCE

The role of sucrose-metabolizing enzymes in pear fruit that differ in sucrose accumulation

(2013) Hu Ping Zhang et al.   ACTA PHYSIOLOGIAE PLANTARUM

The rare sugar d-allose acts as a triggering molecule of rice defence via ROS generation

(2013) Akihito Kano et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Novel Integrated Method for Large-Scale Detection, Identification, and Quantification of Widely Targeted Metabolites: Application in the Study of Rice Metabolomics

(2013) Wei Chen et al.   Molecular Plant

Sucrose functions as a signal involved in the regulation of strawberry fruit development and ripening

(2013) Haifeng Jia et al.   NEW PHYTOLOGIST

Kiwifruit: our daily prescription for health

(2012) Welma Stonehouse et al.   CANADIAN JOURNAL OF PHYSIOLOGY AND PHARMACOLOGY

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Fruit development of the diploid kiwifruit, Actinidia chinensis 'Hort16A'

(2011) Annette C Richardson et al.   BMC PLANT BIOLOGY

Regulation of L-ascorbic acid content in strawberry fruits

(2011) Eduardo Cruz-Rus et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolic Profiling during Peach Fruit Development and Ripening Reveals the Metabolic Networks That Underpin Each Developmental Stage

(2011) V. A. Lombardo et al.   PLANT PHYSIOLOGY

Developmental changes of carbohydrates, organic acids, amino acids, and phenolic compounds in ‘Honeycrisp’ apple flesh

(2010) Yanzi Zhang et al.   FOOD CHEMISTRY

Analysis of genes involved in l-ascorbic acid biosynthesis during growth and ripening of grape berries

(2010) Eduardo Cruz-Rus et al.   JOURNAL OF PLANT PHYSIOLOGY

Isolation and characterization of an apple cytosolic malate dehydrogenase gene reveal its function in malate synthesis

(2010) Yu-Xin Yao et al.   JOURNAL OF PLANT PHYSIOLOGY

Evidence That High Activity of Vacuolar Invertase Is Required for Cotton Fiber and Arabidopsis Root Elongation through Osmotic Dependent and Independent Pathways, Respectively

(2010) L. Wang et al.   PLANT PHYSIOLOGY

Not just a circle: flux modes in the plant TCA cycle

(2010) Lee J. Sweetlove et al.   TRENDS IN PLANT SCIENCE

Lipoxygenase Gene Expression in Ripening Kiwifruit in Relation to Ethylene and Aroma Production

(2009) Bo Zhang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Gene expression studies in kiwifruit and gene over-expression in Arabidopsis indicates that GDP-L-galactose guanyltransferase is a major control point of vitamin C biosynthesis

(2009) Sean M. Bulley et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of malate metabolism in grape berry and other developing fruits

(2009) Crystal Sweetman et al.   PHYTOCHEMISTRY

Gene and Metabolite Regulatory Network Analysis of Early Developing Fruit Tissues Highlights New Candidate Genes for the Control of Tomato Fruit Composition and Development

(2009) F. Mounet et al.   PLANT PHYSIOLOGY

Sugar and Organic Acid Composition in the Fruit Juice of Different Actinidia Varieties

(2008) Ichiro NISHIYAMA et al.   FOOD SCIENCE AND TECHNOLOGY RESEARCH

Changes in pigments and plastid ultrastructure during ripening of green-fleshed and yellow-fleshed kiwifruit

(2008) Mirco Montefiori et al.   SCIENTIA HORTICULTURAE

Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models

(2007) Susanne Wiklund et al.   ANALYTICAL CHEMISTRY