DNA barcoding reveals cryptic diversity and peculiar phylogeographic patterns in mojarras (Perciformes: Gerreidae) from the Caribbean and South-western Atlantic

South-western Atlantic reef fishes: Zoogeographical patterns and ecological drivers reveal a secondary biodiversity centre in the Atlantic Ocean

(2018) Hudson T. Pinheiro et al.   DIVERSITY AND DISTRIBUTIONS

Phylogeny of the subfamily Stelliferinae suggests speciation in Ophioscion Gill, 1863 (Sciaenidae: Perciformes) in the western South Atlantic

(2018) Tárcia Fernanda da Silva et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Comparison of Methods for Molecular Species Delimitation Across a Range of Speciation Scenarios

(2018) Arong Luo et al.   SYSTEMATIC BIOLOGY

Identification of a New Mullet Species Complex Based on an Integrative Molecular and Cytogenetic Investigation of Mugil hospes (Mugilidae: Mugiliformes)

(2018) Mauro Nirchio et al.   Frontiers in Genetics

The flounder next door: Closer evolutionary relationship between allopatric than sympatric Bothus (Rafinesque, 1810) species (Pleuronectiformes, Bothidae)

(2018) Leandro A. Argolo et al.   ZOOLOGISCHER ANZEIGER

Barcoding Atlantic Canada’s mesopelagic and upper bathypelagic marine fishes

(2017) Ellen L. Kenchington et al.   PLoS One

DNA barcoding of coastal ichthyofauna from Bahia, northeastern Brazil, South Atlantic: High efficiency for systematics and identification of cryptic diversity

(2016) José Henrique Souza Galdino Brandão et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

The multiple applications of DNA barcodes in avian evolutionary studies

(2016) Ana S. Barreira et al.   GENOME

Shared phylogeographical breaks in a Caribbean coral reef sponge and its invertebrate commensals

(2016) Melissa B. DeBiasse et al.   JOURNAL OF BIOGEOGRAPHY

Population structure and cryptic speciation in bonnethead sharksSphyrna tiburoin the south-eastern U.S.A. and Caribbean

(2016) A. T. Fields et al.   JOURNAL OF FISH BIOLOGY

Early Pleistocene lineages of Bagre bagre (Linnaeus, 1766) (Siluriformes: Ariidae), from the Atlantic coast of South America, with insights into the demography and biogeography of the species

(2016) Wemerson C. da Silva et al.   Neotropical Ichthyology

Phylogeographic patterns of a lower intertidal isopod in the Gulf of California and the Caribbean and comparison with other intertidal isopods

(2016) Luis A. Hurtado et al.   Ecology and Evolution

Formation of the Isthmus of Panama

(2016) A. ODea et al.   Science Advances

Population Structure of the Rockpool Blenny Entomacrodus vomerinus Shows Source-Sink Dynamics among Ecoregions in the Tropical Southwestern Atlantic

(2016) Jessika M. M. Neves et al.   PLoS One

DNA barcoding and COI sequence variation in Mediterranean lanternfishes larvae

(2015) A. M. Pappalardo et al.   HYDROBIOLOGIA

Biological evidence supports an early and complex emergence of the Isthmus of Panama

(2015) Christine D. Bacon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

popart: full-feature software for haplotype network construction

(2015) Jessica W. Leigh et al.   Methods in Ecology and Evolution

Evolutionary dynamics of rDNA genes on chromosomes of the Eucinostomus fishes: cytotaxonomic and karyoevolutive implications

(2014) L.L. Calado et al.   GENETICS AND MOLECULAR RESEARCH

DNA barcoding provides support for a cryptic species complex within the globally distributed and fishery important opah (Lampris guttatus)

(2014) John R. Hyde et al.   Molecular Ecology Resources

DNA Barcoding for Species Assignment: The Case of Mediterranean Marine Fishes

(2014) Monica Landi et al.   PLoS One

Cryptic Diversity Between Two Imparfinis Species (Siluriformes, Heptapteridae) by Cytogenetic Analysis and DNA Barcoding

(2014) Milena Ferreira et al.   Zebrafish

A cornucopia of cryptic species - a DNA barcode analysis of the gobiid fish genus Trimma (Percomorpha, Gobiiformes)

(2014) Richard Winterbottom et al.   ZooKeys

A general species delimitation method with applications to phylogenetic placements

(2013) Jiajie Zhang et al.   BIOINFORMATICS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System

(2013) Sujeevan Ratnasingham et al.   PLoS One

Cenozoic climate change and diversification on the continental shelf and slope: evolution of gastropod diversity in the family Solariellidae (Trochoidea)

(2013) S. T. Williams et al.   Ecology and Evolution

RAxML-Light: a tool for computing terabyte phylogenies

(2012) A. Stamatakis et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

DNA barcodes identify marine fishes of São Paulo State, Brazil

(2012) Amanda de Oliveira Ribeiro et al.   Molecular Ecology Resources

Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding

(2012) SAMUEL D. J. BROWN et al.   Molecular Ecology Resources

Using DNA Barcoding to Assess Caribbean Reef Fish Biodiversity: Expanding Taxonomic and Geographic Coverage

(2012) Lee A. Weigt et al.   PLoS One

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

(2011) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

Ecological traits influencing range expansion across large oceanic dispersal barriers: insights from tropical Atlantic reef fishes

(2011) O. J. Luiz et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Humane killing of fishes for scientific research: a comparison of two methods

(2010) J. J. Blessing et al.   JOURNAL OF FISH BIOLOGY

Using DNA barcodes to connect adults and early life stages of marine fishes from the Yucatan Peninsula, Mexico: potential in fisheries management

(2010) Martha Valdez-Moreno et al.   MARINE AND FRESHWATER RESEARCH

Comparative phylogeography of Atlantic reef fishes indicates both origin and accumulation of diversity in the Caribbean

(2008) Luiz A Rocha et al.   BMC EVOLUTIONARY BIOLOGY

DID TECTONIC ACTIVITY STIMULATE OLIGOMIOCENE SPECIATION IN THE INDO-WEST PACIFIC

(2008) Suzanne T. Williams et al.   EVOLUTION

Long-Term Sea-Level Fluctuations Driven by Ocean Basin Dynamics

(2008) R. D. Muller et al.   SCIENCE