Current Perspectives on the Auxin-Mediated Genetic Network that Controls the Induction of Somatic Embryogenesis in Plants

Global scale transcriptome analysis reveals differentially expressed genes involve in early somatic embryogenesis in Dimocarpus longan Lour

(2020) Yukun Chen et al.   BMC GENOMICS

The embryonic transcriptome of Arabidopsis thaliana

(2019) Falko Hofmann et al.   Plant Reproduction

Molecular Communication for Coordinated Seed and Fruit Development: What Can We Learn from Auxin and Sugars?

(2019) Hélène Robert   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Biological agents for 2,4-dichlorophenoxyacetic acid herbicide degradation

(2019) Maria Pilar Serbent et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Arabidopsis LEC1 and LEC2 Orthologous Genes Are Key Regulators of Somatic Embryogenesis in Cassava

(2019) Alejandro Brand et al.   Frontiers in Plant Science

Auxin biosynthesis: spatial regulation and adaptation to stress

(2019) Joshua J Blakeslee et al.   JOURNAL OF EXPERIMENTAL BOTANY

The WUSCHEL-related homeobox transcription factor MtWOX9-1 stimulates somatic embryogenesis in Medicago truncatula

(2019) Varvara E. Tvorogova et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Transcriptome dynamics of cork oak (Quercus suber) somatic embryogenesis reveals active gene players in transcription regulation and phytohormone homeostasis of embryo development

(2019) Tiago Capote et al.   Tree Genetics & Genomes

Unravelling the Metabolic and Hormonal Machinery During Key Steps of Somatic Embryogenesis: A Case Study in Coffee

(2019) Awada et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The miR396–GRF Regulatory Module Controls the Embryogenic Response in Arabidopsis via an Auxin-Related Pathway

(2019) Szczygieł-Sommer et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

WUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis

(2019) Yanfei Ma et al.   Nature Communications

Small RNA profiling in Pinus pinaster reveals the transcriptome of developing seeds and highlights differences between zygotic and somatic embryos

(2019) Andreia S. Rodrigues et al.   Scientific Reports

The explant developmental stage profoundly impacts small RNA-mediated regulation at the dedifferentiation step of maize somatic embryogenesis

(2019) Vasti T. Juárez-González et al.   Scientific Reports

Transcriptome analysis of the induction of somatic embryogenesis in Coffea canephora and the participation of ARF and Aux/IAA genes

(2019) Ana O. Quintana-Escobar et al.   PeerJ

Efficient In Vitro Somatic Embryogenesis and Plant Regeneration from Mature and Immature Embryos of Wheat ( Triticum aestivum L.)

(2018) Roghayeh Ahmadpour et al.   BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY

Aux/IAA Gene Family in Plants: Molecular Structure, Regulation, and Function

(2018) Jie Luo et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genetic Regulation of Zygotic Embryogenesis in Angiosperm Plants

(2018) V. E. Tvorogova et al.   RUSSIAN JOURNAL OF PLANT PHYSIOLOGY

Transcriptome analysis of Lilium Oriental × Trumpet hybrid roots reveals auxin-related genes and stress-related genes involved in picloram-induced somatic embryogenesis induction

(2018) Minmin Chen et al.   JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY

Profiles of Endogenous Phytohormones Over the Course of Norway Spruce Somatic Embryogenesis

(2018) Zuzana Vondrakova et al.   Frontiers in Plant Science

Trichostatin A Triggers an Embryogenic Transition in Arabidopsis Explants via an Auxin-Related Pathway

(2018) Barbara Wójcikowska et al.   Frontiers in Plant Science

Data mining study of hormone biosynthesis gene expression reveals new aspects of somatic embryogenesis regulation

(2018) R. T. Saptari et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

A Robust Auxin Response Network Controls Embryo and Suspensor Development through a bHLH Transcriptional Module

(2018) Tatyana Radoeva et al.   PLANT CELL

Glucocorticoid receptor-regulated TcLEC2 expression triggers somatic embryogenesis in Theobroma cacao leaf tissue

(2018) Andrew S. Fister et al.   PLoS One

Comparative transcriptome analysis highlights the hormone effects on somatic embryogenesis in Catalpa bungei

(2018) Wen Liu et al.   Plant Reproduction

Expression profiling of AUXIN RESPONSE FACTOR genes during somatic embryogenesis induction in Arabidopsis

(2017) Barbara Wójcikowska et al.   PLANT CELL REPORTS

The content of endogenous hormones and sugars in the process of early somatic embryogenesis in the tree fern Cyathea delgadii Sternb.

(2017) Małgorzata Grzyb et al.   PLANT CELL TISSUE AND ORGAN CULTURE

The BABY BOOM transcription factor activates the LEC1-ABI3-FUS3-LEC2 network to induce somatic embryogenesis

(2017) Anneke Horstman et al.   PLANT PHYSIOLOGY

Auxin Signaling

(2017) Ottoline Leyser   PLANT PHYSIOLOGY

Identification of novel miRNAs and miRNA expression profiling in embryogenic tissues of Picea balfouriana treated by 6-benzylaminopurine

(2017) Qingfen Li et al.   PLoS One

Auxin response cell-autonomously controls ground tissue initiation in the earlyArabidopsisembryo

(2017) Barbara K. Möller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Localization and transport of indole-3-acetic acid during somatic embryogenesis in Coffea canephora

(2017) Ruth E. Márquez-López et al.   PROTOPLASMA

Comparative Transcriptome Analysis of SE initial dedifferentiation in cotton of different SE capability

(2017) Aiping Cao et al.   Scientific Reports

Desiccation Treatment and Endogenous IAA Levels Are Key Factors Influencing High Frequency Somatic Embryogenesis in Cunninghamia lanceolata (Lamb.) Hook

(2017) Xiaohong Zhou et al.   Frontiers in Plant Science

miR160 and miR166/165 Contribute to the LEC2-Mediated Auxin Response Involved in the Somatic Embryogenesis Induction in Arabidopsis

(2017) Anna M. Wójcik et al.   Frontiers in Plant Science

Transcriptional Responses to the Auxin Hormone

(2016) Dolf Weijers et al.   Annual Review of Plant Biology

De novo comparative transcriptome analysis provides new insights into sucrose induced somatic embryogenesis in camphor tree (Cinnamomum camphora L.)

(2016) Xueping Shi et al.   BMC GENOMICS

Stem Cell Regulation by Arabidopsis WOX Genes

(2016) Alicja Dolzblasz et al.   Molecular Plant

The auxin response factor MONOPTEROS controls meristem function and organogenesis in both the shoot and root through the direct regulation ofPINgenes

(2016) Naden T. Krogan et al.   NEW PHYTOLOGIST

HSI2 Repressor Recruits MED13 and HDA6 to Down-Regulate Seed Maturation Gene Expression Directly During Arabidopsis Early Seedling Growth

(2016) Tory Chhun et al.   PLANT AND CELL PHYSIOLOGY

De novo transcriptome analysis reveals insights into dynamic homeostasis regulation of somatic embryogenesis in upland cotton (G. hirsutum L.)

(2016) Wen-Han Cheng et al.   PLANT MOLECULAR BIOLOGY

Gene Regulation by the AGL15 Transcription Factor Reveals Hormone Interactions in Somatic Embryogenesis

(2016) Qiaolin Zheng et al.   PLANT PHYSIOLOGY

miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment

(2016) Anna M. Wójcik et al.   PLANTA

Decoding regulatory landscape of somatic embryogenesis reveals differential regulatory networks between japonica and indica rice subspecies

(2016) Yuvraj Indoliya et al.   Scientific Reports

A Review of Auxin Response Factors (ARFs) in Plants

(2016) Si-Bei Li et al.   Frontiers in Plant Science

2,4-D and IAA Amino Acid Conjugates Show Distinct Metabolism in Arabidopsis

(2016) Luděk Eyer et al.   PLoS One

Global scale transcriptome analysis of Arabidopsis embryogenesis in vitro

(2015) Anushka M Wickramasuriya et al.   BMC GENOMICS

The importance of localized auxin production for morphogenesis of reproductive organs and embryos inArabidopsis

(2015) Hélène S. Robert et al.   JOURNAL OF EXPERIMENTAL BOTANY

PHABULOSA Mediates an Auxin Signaling Loop to Regulate Vascular Patterning in Arabidopsis

(2015) Christina Joy Müller et al.   PLANT PHYSIOLOGY

Identification of putative homologs of Larix decidua to BABYBOOM (BBM), LEAFY COTYLEDON1 (LEC1), WUSCHEL-related HOMEOBOX2 (WOX2) and SOMATIC EMBRYOGENESIS RECEPTOR-like KINASE (SERK) during somatic embryogenesis

(2015) Andrea Rupps et al.   PLANTA

Tryptophan-independent auxin biosynthesis contributes to early embryogenesis inArabidopsis

(2015) Bing Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Expression of WOX and PIN genes during somatic and zygotic embryogenesis in Medicago truncatula

(2015) V. E. Tvorogova et al.   RUSSIAN JOURNAL OF GENETICS

Distinct subclades ofAux/IAAgenes are direct targets of ARF5/MP transcriptional regulation

(2014) Naden T. Krogan et al.   NEW PHYTOLOGIST

LEAFY COTYLEDON2-mediated control of the endogenous hormone content: implications for the induction of somatic embryogenesis in Arabidopsis

(2014) Barbara Wójcikowska et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Alterations in the Transcriptome of Soybean in Response to Enhanced Somatic Embryogenesis Promoted by Orthologs of AGAMOUS-Like15 and AGAMOUS-Like18

(2014) Q. Zheng et al.   PLANT PHYSIOLOGY

AtWuschel Promotes Formation of the Embryogenic Callus in Gossypium hirsutum

(2014) Wu Zheng et al.   PLoS One

Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis

(2013) Xiyan Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome Profiling Reveals Auxin and Cytokinin Regulating Somatic Embryogenesis in Different Sister Lines of Cotton Cultivar CCRI24

(2013) Zhenzhen Xu et al.   Journal of Integrative Plant Biology

Insight into the mode of action of 2,4-dichlorophenoxyacetic acid (2,4-D) as an herbicide

(2013) Yaling Song   Journal of Integrative Plant Biology

Analysis of expression profiles of selected genes associated with the regenerative property and the receptivity to gene transfer during somatic embryogenesis in Triticum aestivum L.

(2013) Fabienne Delporte et al.   MOLECULAR BIOLOGY REPORTS

HISTONE DEACETYLASE19 Interacts with HSL1 and Participates in the Repression of Seed Maturation Genes inArabidopsisSeedlings

(2013) Yi Zhou et al.   PLANT CELL

Wuschel overexpression promotes somatic embryogenesis and induces organogenesis in cotton (Gossypium hirsutum L.) tissues cultured in vitro

(2013) O. Bouchabké-Coussa et al.   PLANT CELL REPORTS

Rapid expression and validation of seed-specific constructs in transgenic LEC2 induced somatic embryos of Brassica napus

(2013) Srinivas Belide et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Identification of Direct Targets of FUSCA3, a Key Regulator of Arabidopsis Seed Development

(2013) F. Wang et al.   PLANT PHYSIOLOGY

LEAFY COTYLEDON2 (LEC2) promotes embryogenic induction in somatic tissues of Arabidopsis, via YUCCA-mediated auxin biosynthesis

(2013) Barbara Wójcikowska et al.   PLANTA

Extensive Modulation of the Transcription Factor Transcriptome during Somatic Embryogenesis in Arabidopsis thaliana

(2013) Marta Gliwicka et al.   PLoS One

Induced Expression of AtLEC1 and AtLEC2 Differentially Promotes Somatic Embryogenesis in Transgenic Tobacco Plants

(2013) Fengdan Guo et al.   PLoS One

Local auxin biosynthesis regulation by PLETHORA transcription factors controls phyllotaxis in Arabidopsis

(2013) V. Pinon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

AINTEGUMENTA-LIKE proteins: hubs in a plethora of networks

(2013) Anneke Horstman et al.   TRENDS IN PLANT SCIENCE

Regulation of the seed to seedling developmental phase transition by the LAFL and VAL transcription factor networks

(2013) Haiyan Jia et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Transcript profiling reveals complex auxin signalling pathway and transcription regulation involved in dedifferentiation and redifferentiation during somatic embryogenesis in cotton

(2012) Xiyan Yang et al.   BMC PLANT BIOLOGY

Efficient Regeneration Potential is Closely Related to Auxin Exposure Time and Catalase Metabolism During the Somatic Embryogenesis of Immature Embryos in Triticum aestivum L

(2012) Maoyun She et al.   MOLECULAR BIOTECHNOLOGY

Induction of Somatic Embryos in Arabidopsis Requires Local YUCCA Expression Mediated by the Down-Regulation of Ethylene Biosynthesis

(2012) Bo Bai et al.   Molecular Plant

Arabidopsis Transcription Factor Genes NF-YA1, 5, 6, and 9 Play Redundant Roles in Male Gametogenesis, Embryogenesis, and Seed Development

(2012) Jinye Mu et al.   Molecular Plant

A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin

(2012) Luz Irina A Calderón Villalobos et al.   Nature Chemical Biology

A candidate auxin-responsive expression marker gene, EgIAA9, for somatic embryogenesis in oil palm (Elaeis guineensis Jacq.)

(2012) Siew-Eng Ooi et al.   PLANT CELL TISSUE AND ORGAN CULTURE

A hormonal misunderstanding in Acca sellowiana embryogenesis: levels of zygotic embryogenesis do not match those of somatic embryogenesis

(2012) Rosete Pescador et al.   PLANT GROWTH REGULATION

Elongation-related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana

(2012) Astrid Junker et al.   PLANT JOURNAL

Proper regeneration from in vitro cultured Arabidopsis thaliana requires the microRNA-directed action of an auxin response factor

(2012) Meng Qiao et al.   PLANT JOURNAL

MicroRNA–Mediated Repression of the Seed Maturation Program during Vegetative Development in Arabidopsis

(2012) Xurong Tang et al.   PLoS Genetics

Differential response of young and adult leaves to herbicide 2,4-dichlorophenoxyacetic acid in pea plants: role of reactive oxygen species

(2011) DIANA M. PAZMIÑO et al.   PLANT CELL AND ENVIRONMENT

Differential gene expression during somatic embryogenesis in the maize (Zea mays L.) inbred line H99

(2011) Lifang Sun et al.   PLANT CELL TISSUE AND ORGAN CULTURE

LEAFY COTYLEDON1, FUSCA3 expression and auxin treatment in relation to somatic embryogenesis induction in Arabidopsis

(2011) Agnieszka Ledwoń et al.   PLANT GROWTH REGULATION

Auxin Biosynthesis and Its Role in Plant Development

(2010) Yunde Zhao   Annual Review of Plant Biology

Induction of somatic embryogenesis as an example of stress-related plant reactions

(2010) Maria Amely Zavattieri et al.   ELECTRONIC JOURNAL OF BIOTECHNOLOGY

Characterization of expression dynamics of WOX homeodomain transcription factors during somatic embryogenesis in Vitis vinifera

(2010) Giorgio Gambino et al.   JOURNAL OF EXPERIMENTAL BOTANY

MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor

(2010) Alexandra Schlereth et al.   NATURE

Comparative expression pattern analysis of WUSCHEL-related homeobox 2 (WOX2) and WOX8/9 in developing seeds and somatic embryos of the gymnosperm Picea abies

(2010) Joakim Palovaara et al.   NEW PHYTOLOGIST

Diverse Roles and Mechanisms of Gene Regulation by the Arabidopsis Seed Maturation Master Regulator FUS3 Revealed by Microarray Analysis

(2010) Akiko Yamamoto et al.   PLANT AND CELL PHYSIOLOGY

Hormonally regulated overexpression of Arabidopsis WUS and conifer LEC1 (CHAP3A) in transgenic white spruce: implications for somatic embryo development and somatic seedling growth

(2010) Krystyna Klimaszewska et al.   PLANT CELL REPORTS

Overexpression of WUSCHEL in C. chinense causes ectopic morphogenesis

(2010) L. Y. Solís-Ramos et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Arabidopsis EMBRYOMAKER encoding an AP2 domain transcription factor plays a key role in developmental change from vegetative to embryonic phase

(2010) Ryo Tsuwamoto et al.   PLANT MOLECULAR BIOLOGY

Auxin regulates distal stem cell differentiation in Arabidopsis roots

(2010) Z. Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Past, Present, and Future of Chemical Biology in Auxin Research

(2009) Bert De Rybel et al.   ACS Chemical Biology

Regulation of preprocambial cell state acquisition by auxin signaling in Arabidopsis leaves

(2009) T. J. Donner et al.   DEVELOPMENT

Auxin herbicides: current status of mechanism and mode of action

(2009) Klaus Grossmann   PEST MANAGEMENT SCIENCE

Global Identification of Targets of the Arabidopsis MADS Domain Protein AGAMOUS-Like15

(2009) Y. Zheng et al.   PLANT CELL

LEAFY COTYLEDON2 gene expression and auxin treatment in relation to embryogenic capacity of Arabidopsis somatic cells

(2009) Agnieszka Ledwoń et al.   PLANT CELL REPORTS

Auxin-inducedWUSexpression is essential for embryonic stem cell renewal during somatic embryogenesis in Arabidopsis

(2009) Ying H. Su et al.   PLANT JOURNAL

Transcriptome analysis during somatic embryogenesis of the tropical monocot Elaeis guineensis: evidence for conserved gene functions in early development

(2009) Hsiang-Chun Lin et al.   PLANT MOLECULAR BIOLOGY

Auxin Control of Embryo Patterning

(2009) B. Moller et al.   Cold Spring Harbor Perspectives in Biology

The WUS homeobox-containing (WOX) protein family

(2009) Eric van der Graaff et al.   GENOME BIOLOGY

Genome-wide transcriptional analysis of super-embryogenic Medicago truncatula explant cultures

(2008) Nijat Imin et al.   BMC PLANT BIOLOGY

Differential Expression of WOX Genes Mediates Apical-Basal Axis Formation in the Arabidopsis Embryo

(2008) Holger Breuninger et al.   DEVELOPMENTAL CELL

The CHD3 RemodelerPICKLEPromotes Trimethylation of Histone H3 Lysine 27

(2008) Heng Zhang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Effects of brassinosteroid, auxin, and cytokinin on ethylene production in Arabidopsis thaliana plants

(2008) R. N. Arteca et al.   JOURNAL OF EXPERIMENTAL BOTANY

Maturation of somatic embryos in two embryogenic cultures of Picea morrisonicola Hayata as affected by alternation of endogenous IAA content

(2008) Yue Ken Liao et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Expression of WUSCHEL in Coffea canephora causes ectopic morphogenesis and increases somatic embryogenesis

(2008) A. Arroyo-Herrera et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Molecular regulation of somatic embryogenesis in potato: an auxin led perspective

(2008) Sanjeev Kumar Sharma et al.   PLANT MOLECULAR BIOLOGY

BABY BOOM target genes provide diverse entry points into cell proliferation and cell growth pathways

(2008) Paul Passarinho et al.   PLANT MOLECULAR BIOLOGY

The Transcription Factor MtSERF1 of the ERF Subfamily Identified by Transcriptional Profiling Is Required for Somatic Embryogenesis Induced by Auxin Plus Cytokinin in Medicago truncatula

(2008) F. R. Mantiri et al.   PLANT PHYSIOLOGY

Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: Implications for somatic embryogenesis

(2008) S. L. Stone et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

LECs go crazy in embryo development

(2008) S BRAYBROOK et al.   TRENDS IN PLANT SCIENCE