WUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis

Feedback from Lateral Organs Controls Shoot Apical Meristem Growth by Modulating Auxin Transport

(2018) Bihai Shi et al.   DEVELOPMENTAL CELL

A Molecular Framework for Auxin-Controlled Homeostasis of Shoot Stem Cells in Arabidopsis

(2018) Linjie Luo et al.   Molecular Plant

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

(2018) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

HAIRY MERISTEM with WUSCHEL confines CLAVATA3 expression to the outer apical meristem layers

(2018) Yun Zhou et al.   SCIENCE

Live Confocal Imaging of Developing Arabidopsis Flowers

(2017) Nathanaël Prunet   Jove-Journal of Visualized Experiments

Shoot stem cell specification in roots by the WUSCHEL transcription factor

(2017) Boaz Negin et al.   PLoS One

Detecting broad domains and narrow peaks in ChIP-seq data with hiddenDomains

(2016) Joshua Starmer et al.   BMC BIOINFORMATICS

Auxin Acts through MONOPTEROS to Regulate Plant Cell Polarity and Pattern Phyllotaxis

(2016) Neha Bhatia et al.   CURRENT BIOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Reporters for sensitive and quantitative measurement of auxin response

(2015) Che-Yang Liao et al.   NATURE METHODS

Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate

(2015) Miin-Feng Wu et al.   eLife

A high-resolution gene expression map of the Arabidopsis shoot meristem stem cell niche

(2014) R. K. Yadav et al.   DEVELOPMENT

A mechanistic framework for noncell autonomous stem cell induction inArabidopsis

(2014) Gabor Daum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

PAVIS: a tool for Peak Annotation and Visualization

(2013) Weichun Huang et al.   BIOINFORMATICS

WOX5–IAA17 Feedback Circuit-Mediated Cellular Auxin Response Is Crucial for the Patterning of Root Stem Cell Niches in Arabidopsis

(2013) Huiyu Tian et al.   Molecular Plant

Plant stem cell maintenance involves direct transcriptional repression of differentiation program

(2013) R. K. Yadav et al.   Molecular Systems Biology

GreenGate - A Novel, Versatile, and Efficient Cloning System for Plant Transgenesis

(2013) Athanasios Lampropoulos et al.   PLoS One

Software for Computing and Annotating Genomic Ranges

(2013) Michael Lawrence et al.   PLoS Computational Biology

A novel sensor to map auxin response and distribution at high spatio-temporal resolution

(2012) Géraldine Brunoud et al.   NATURE

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Deletion of MP/ARF5 domains III and IV reveals a requirement for Aux/IAA regulation in Arabidopsis leaf vascular patterning

(2012) Naden T. Krogan et al.   NEW PHYTOLOGIST

Genome-Wide Identification of Regulatory DNA Elements and Protein-Binding Footprints Using Signatures of Open Chromatin in Arabidopsis

(2012) W. Zhang et al.   PLANT CELL

Callose Biosynthesis Regulates Symplastic Trafficking during Root Development

(2011) Anne Vatén et al.   DEVELOPMENTAL CELL

WUSCHEL protein movement mediates stem cell homeostasis in the Arabidopsis shoot apex

(2011) R. K. Yadav et al.   GENES & DEVELOPMENT

The auxin signalling network translates dynamic input into robust patterning at the shoot apex

(2011) T. Vernoux et al.   Molecular Systems Biology

WUSCHEL mediates stem cell homeostasis by regulating stem cell number and patterns of cell division and differentiation of stem cell progenitors

(2010) R. K. Yadav et al.   DEVELOPMENT

Transcriptional Control of a Plant Stem Cell Niche

(2010) Wolfgang Busch et al.   DEVELOPMENTAL CELL

A Simple Method for Gene Expression and Chromatin Profiling of Individual Cell Types within a Tissue

(2010) Roger B. Deal et al.   DEVELOPMENTAL CELL

Hormonal control of the shoot stem-cell niche

(2010) Zhong Zhao et al.   NATURE

MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor

(2010) Alexandra Schlereth et al.   NATURE

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Role of A-type ARABIDOPSIS RESPONSE REGULATORS in meristem maintenance and regeneration

(2009) Sabine Buechel et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Arabidopsis WUSCHEL Is a Bifunctional Transcription Factor That Acts as a Repressor in Stem Cell Regulation and as an Activator in Floral Patterning

(2009) M. Ikeda et al.   PLANT CELL

Gene expression map of the Arabidopsis shoot apical meristem stem cell niche

(2009) R. K. Yadav et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple feedback loops through cytokinin signaling control stem cell number within the Arabidopsis shoot meristem

(2009) S. P. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin: The Looping Star in Plant Development

(2008) René Benjamins et al.   Annual Review of Plant Biology

Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis

(2008) Bruno Müller et al.   NATURE

Groucho/Tup1 family co-repressors in plant development

(2008) Zhongchi Liu et al.   TRENDS IN PLANT SCIENCE