miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment

Somatic embryogenesis — Stress-induced remodeling of plant cell fate

(2015) Attila Fehér   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Global scale transcriptome analysis of Arabidopsis embryogenesis in vitro

(2015) Anushka M Wickramasuriya et al.   BMC GENOMICS

mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs

(2015) Andrzej Zielezinski et al.   BMC PLANT BIOLOGY

50 years of Arabidopsis research: highlights and future directions

(2015) Nicholas J. Provart et al.   NEW PHYTOLOGIST

Induced folding in RNA recognition byArabidopsis thalianaDCL1

(2015) Irina P. Suarez et al.   NUCLEIC ACIDS RESEARCH

MicroRNA functions in plant embryos: Figure 1

(2014) Divya Vashisht et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Diversity and specificity: auxin perception and signaling through the TIR1/AFB pathway

(2014) Renhou Wang et al.   CURRENT OPINION IN PLANT BIOLOGY

2,4-Dichlorophenoxyacetic acid promotes S-nitrosylation and oxidation of actin affecting cytoskeleton and peroxisomal dynamics

(2014) M. Rodríguez-Serrano et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of a miR393-Resistant Form of Transport Inhibitor Response Protein 1 (mTIR1) Enhances Salt Tolerance by Increased Osmoregulation and Na+ Exclusion in Arabidopsis thaliana

(2014) Zhehao Chen et al.   PLANT AND CELL PHYSIOLOGY

Global Regulation of Embryonic Patterning in Arabidopsis by MicroRNAs

(2014) W. F. Seefried et al.   PLANT PHYSIOLOGY

miR393 Is Required for Production of Proper Auxin Signalling Outputs

(2014) David Windels et al.   PLoS One

MiR393 Regulation of Auxin Signaling and Redox-Related Components during Acclimation to Salinity in Arabidopsis

(2014) María José Iglesias et al.   PLoS One

Recovery ofdicer-like 1-late flowering phenotype by miR172 expressed by the noncanonical DCL4-dependent biogenesis pathway

(2014) Masayuki Tsuzuki et al.   RNA

Classification and Comparison of Small RNAs from Plants

(2013) Michael J. Axtell   Annual Review of Plant Biology

Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis

(2013) Xiyan Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Bidirectional processing of pri-miRNAs with branched terminal loops by Arabidopsis Dicer-like1

(2013) Hongliang Zhu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

LEAFY COTYLEDON2 (LEC2) promotes embryogenic induction in somatic tissues of Arabidopsis, via YUCCA-mediated auxin biosynthesis

(2013) Barbara Wójcikowska et al.   PLANTA

Comparative Analysis Reveals Dynamic Changes in miRNAs and Their Targets and Expression during Somatic Embryogenesis in Longan (Dimocarpus longan Lour.)

(2013) Yuling Lin et al.   PLoS One

Extensive Modulation of the Transcription Factor Transcriptome during Somatic Embryogenesis in Arabidopsis thaliana

(2013) Marta Gliwicka et al.   PLoS One

Regulation of the seed to seedling developmental phase transition by the LAFL and VAL transcription factor networks

(2013) Haiyan Jia et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Transcript profiling reveals complex auxin signalling pathway and transcription regulation involved in dedifferentiation and redifferentiation during somatic embryogenesis in cotton

(2012) Xiyan Yang et al.   BMC PLANT BIOLOGY

Induction of Somatic Embryos in Arabidopsis Requires Local YUCCA Expression Mediated by the Down-Regulation of Ethylene Biosynthesis

(2012) Bo Bai et al.   Molecular Plant

A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin

(2012) Luz Irina A Calderón Villalobos et al.   Nature Chemical Biology

Distinctive expression patterns and roles of the miRNA393/TIR1 homolog module in regulating flag leaf inclination and primary and crown root growth in rice (Oryza sativa)

(2012) Hongwu Bian et al.   NEW PHYTOLOGIST

Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis

(2012) Junhong Zhang et al.   PLANTA

OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice

(2012) Kuaifei Xia et al.   PLoS One

Deep Sequencing and Microarray Hybridization Identify Conserved and Species-Specific MicroRNAs during Somatic Embryogenesis in Hybrid Yellow Poplar

(2012) Tingting Li et al.   PLoS One

MicroRNA turnover: when, how, and why

(2012) Stefan Rüegger et al.   TRENDS IN BIOCHEMICAL SCIENCES

Regulation of auxin response by miR393-targeted transport inhibitor response protein 1 is involved in normal development in Arabidopsis

(2011) Zhe-Hao Chen et al.   PLANT MOLECULAR BIOLOGY

MicroRNAs Regulate the Timing of Embryo Maturation in Arabidopsis

(2011) M. R. Willmann et al.   PLANT PHYSIOLOGY

miR393 and Secondary siRNAs Regulate Expression of the TIR1/AFB2 Auxin Receptor Clade and Auxin-Related Development of Arabidopsis Leaves

(2011) A. Si-Ammour et al.   PLANT PHYSIOLOGY

Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus

(2011) Chong-Jian Chen et al.   RNA Biology

MicroRNAs prevent precocious gene expression and enable pattern formation during plant embryogenesis

(2010) M. D. Nodine et al.   GENES & DEVELOPMENT

Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis

(2010) Josh T Cuperus et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection

(2010) H. Garcia-Ruiz et al.   PLANT CELL

Stage and tissue-specific modulation of ten conserved miRNAs and their targets during somatic embryogenesis of Valencia sweet orange

(2010) Xiao-Meng Wu et al.   PLANTA

Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana

(2010) E. A. Vidal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin-inducedWUSexpression is essential for embryonic stem cell renewal during somatic embryogenesis in Arabidopsis

(2009) Ying H. Su et al.   PLANT JOURNAL

Complex regulation of the TIR1/AFB family of auxin receptors

(2009) G. Parry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin Receptors and Plant Development: A New Signaling Paradigm

(2008) Keithanne Mockaitis et al.   Annual Review of Cell and Developmental Biology

LECs go crazy in embryo development

(2008) S BRAYBROOK et al.   TRENDS IN PLANT SCIENCE