Genome-wide association mapping of partial resistance to Aphanomyces euteiches in pea

SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population

(2016) Gilles Boutet et al.   BMC GENOMICS

Genetic diversity and trait genomic prediction in a pea diversity panel

(2015) Judith Burstin et al.   BMC GENOMICS

Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel

(2015) Luis Samayoa et al.   BMC PLANT BIOLOGY

A wheat ABC transporter contributes to both grain formation and mycotoxin tolerance

(2015) Stephanie Walter et al.   JOURNAL OF EXPERIMENTAL BOTANY

Population structure and marker-trait association studies of iron, zinc and selenium concentrations in seed of field pea (Pisum sativum L.)

(2015) Marwan Diapari et al.   MOLECULAR BREEDING

Association mapping of agronomic and quality traits in USDA pea single-plant collection

(2015) Peng Cheng et al.   MOLECULAR BREEDING

First Report of Root Rot of Field Pea Caused by Aphanomyces euteiches in Alberta, Canada

(2015) S. Chatterton et al.   PLANT DISEASE

Loci and candidate gene identification for resistance toSclerotinia sclerotiorumin soybean (Glycine maxL. Merr.) via association and linkage maps

(2015) Xue Zhao et al.   PLANT JOURNAL

Full-lengthde novoassembly of RNA-seq data in pea (Pisum sativumL.) provides a gene expression atlas and gives insights into root nodulation in this species

(2015) Susete Alves-Carvalho et al.   PLANT JOURNAL

Genome-wide association mapping for stripe rust (Puccinia striiformis F. sp. tritici) in US Pacific Northwest winter wheat (Triticum aestivum L.)

(2015) Y. Naruoka et al.   THEORETICAL AND APPLIED GENETICS

Resistance to Gray Leaf Spot of Maize: Genetic Architecture and Mechanisms Elucidated through Nested Association Mapping and Near-Isogenic Line Analysis

(2015) Jacqueline M. Benson et al.   PLoS Genetics

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Genome-Wide Association Mapping for Yield and Other Agronomic Traits in an Elite Breeding Population of Tropical Rice (Oryza sativa)

(2015) Hasina Begum et al.   PLoS One

Potential of Association Mapping and Genomic Selection to Explore PI 88788 Derived Soybean Cyst Nematode Resistance

(2015) Yong Bao et al.   Plant Genome

Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea

(2014) Jorge Duarte et al.   BMC GENOMICS

Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection

(2014) Charles T Zila et al.   BMC PLANT BIOLOGY

Identification of significant single nucleotide polymorphisms for resistance to maize rough dwarf disease in elite maize (Zea mays L.) inbred lines

(2014) Derong Hao et al.   EUPHYTICA

Reviving of the endophytic bacterial community as a putative mechanism of plant resistance

(2014) Olga Podolich et al.   PLANT AND SOIL

Potential of a tomato MAGIC population to decipher the genetic control of quantitative traits and detect causal variants in the resequencing era

(2014) Laura Pascual et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-Wide Association in Tomato Reveals 44 Candidate Loci for Fruit Metabolic Traits

(2014) C. Sauvage et al.   PLANT PHYSIOLOGY

Genome-Wide Association Study Reveals Novel Quantitative Trait Loci Associated with Resistance to Multiple Leaf Spot Diseases of Spring Wheat

(2014) Suraj Gurung et al.   PLoS One

Gene-based SNP discovery and genetic mapping in pea

(2014) Anoop Sindhu et al.   THEORETICAL AND APPLIED GENETICS

Impacts of Resistance Gene Genetics, Function, and Evolution on a Durable Future

(2013) Richard W. Michelmore et al.   Annual Review of Phytopathology

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

SNP marker discovery, linkage map construction and identification of QTLs for enhanced salinity tolerance in field pea (Pisum sativum L.)

(2013) Antonio Leonforte et al.   BMC PLANT BIOLOGY

QTL meta-analysis provides a comprehensive view of loci controlling partial resistance to Aphanomyces euteiches in four sources of resistance in pea

(2013) Céline Hamon et al.   BMC PLANT BIOLOGY

Association mapping and meta-analysis: two complementary approaches for the detection of reliable Septoria tritici blotch quantitative resistance in bread wheat (Triticum aestivum L.)

(2013) Ellen Goudemand et al.   MOLECULAR BREEDING

Genome-wide association mapping reveals genetic architecture of durable spot blotch resistance in US barley breeding germplasm

(2013) Hao Zhou et al.   MOLECULAR BREEDING

The advantages and limitations of trait analysis with GWAS: a review

(2013) Arthur Korte et al.   Plant Methods

Gibberellin 3-oxidase Gene Expression Patterns Influence Gibberellin Biosynthesis, Growth, and Development in Pea

(2013) D. M. Reinecke et al.   PLANT PHYSIOLOGY

Searching for novel sources of field resistance to Ug99 and Ethiopian stem rust races in durum wheat via association mapping

(2013) Tesfaye Letta et al.   THEORETICAL AND APPLIED GENETICS

BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms

(2012) O. Sosnowski et al.   BIOINFORMATICS

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Plant architecture, its diversity and manipulation in agronomic conditions, in relation with pest and pathogen attacks

(2012) E. Costes et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Genetic diversity, population structure and genome-wide marker-trait association analysis emphasizing seed nutrients of the USDA pea (Pisum sativum L.) core collection

(2012) Soon-Jae Kwon et al.   Genes & Genomics

Registration of Pea Germplasm Lines Partially Resistant to Aphanomyces Root Rot for Breeding Fresh or Freezer Pea and Dry Pea Types

(2012) Rebecca J. McGee et al.   Journal of Plant Registrations

Imputing Missing Genotypes with WeightedkNearest Neighbors

(2012) Holger Schwender   JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES

An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations

(2012) Vincent Segura et al.   NATURE GENETICS

A conserved molecular basis for photoperiod adaptation in two temperate legumes

(2012) J. L. Weller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant–pathogen interactions: disease resistance in modern agriculture

(2012) Lesley A. Boyd et al.   TRENDS IN GENETICS

New consistent QTL in pea associated with partial resistance to Aphanomyces euteiches in multiple French and American environments

(2011) Céline Hamon et al.   THEORETICAL AND APPLIED GENETICS

Quantitative Disease Resistance and Quantitative Resistance Loci in Breeding

(2010) Dina A. St.Clair   Annual Review of Phytopathology

Broad-spectrum and durability: understanding of quantitative disease resistance

(2010) Yanjun Kou et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Association genetics of complex traits in plants

(2010) Pär K. Ingvarsson et al.   NEW PHYTOLOGIST

Association Mapping: Critical Considerations Shift from Genotyping to Experimental Design

(2009) S. Myles et al.   PLANT CELL

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

From mutations to MAGIC: resources for gene discovery, validation and delivery in crop plants

(2008) Colin Cavanagh et al.   CURRENT OPINION IN PLANT BIOLOGY

Genetic Design and Statistical Power of Nested Association Mapping in Maize

(2008) Jianming Yu et al.   GENETICS

Plant Receptor-Like Serine Threonine Kinases: Roles in Signaling and Plant Defense

(2008) Ahmed J. Afzal et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The Pea DELLA Proteins LA and CRY Are Important Regulators of Gibberellin Synthesis and Root Growth

(2008) D. E. Weston et al.   PLANT PHYSIOLOGY

Shades of gray: the world of quantitative disease resistance

(2008) Jesse A. Poland et al.   TRENDS IN PLANT SCIENCE