Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea

The complex transcriptional landscape of the anucleate human platelet

(2013) Paul F Bray et al.   BMC GENOMICS

QTL meta-analysis provides a comprehensive view of loci controlling partial resistance to Aphanomyces euteiches in four sources of resistance in pea

(2013) Céline Hamon et al.   BMC PLANT BIOLOGY

Combining gene expression and genetic analyses to identify candidate genes involved in cold responses in pea

(2013) Sylvain Legrand et al.   JOURNAL OF PLANT PHYSIOLOGY

Designing a transcriptome next-generation sequencing project for a nonmodel plant species1

(2012) Susan R. Strickler et al.   AMERICAN JOURNAL OF BOTANY

Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing

(2012) Xuehui Li et al.   BMC GENOMICS

Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

(2012) Huaan Yang et al.   BMC GENOMICS

Transcriptome sequencing for SNP discovery across Cucumis melo

(2012) José Blanca et al.   BMC GENOMICS

Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers

(2012) Sukhjiwan Kaur et al.   BMC GENOMICS

High-Throughput SNP Discovery and Genotyping for Constructing a Saturated Linkage Map of Chickpea (Cicer arietinum L.)

(2012) R. Gaur et al.   DNA RESEARCH

Single-nucleotide polymorphism discovery and diversity in the model legumeMedicago truncatula

(2012) Karine Loridon et al.   Molecular Ecology Resources

Maize (Zea mays L.) Genome Diversity as Revealed by RNA-Sequencing

(2012) Candice N. Hansey et al.   PLoS One

SNP Discovery with EST and NextGen Sequencing in Switchgrass (Panicum virgatum L.)

(2012) Elhan S. Ersoz et al.   PLoS One

Genetic diversity in European Pisum germplasm collections

(2012) R. Jing et al.   THEORETICAL AND APPLIED GENETICS

Accessing complex crop genomes with next-generation sequencing

(2012) David Edwards et al.   THEORETICAL AND APPLIED GENETICS

Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing

(2011) Susanne U Franssen et al.   BMC GENOMICS

Single-nucleotide polymorphism discovery by high-throughput sequencing in sorghum

(2011) James C Nelson et al.   BMC GENOMICS

New consistent QTL in pea associated with partial resistance to Aphanomyces euteiches in multiple French and American environments

(2011) Céline Hamon et al.   THEORETICAL AND APPLIED GENETICS

High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.)

(2011) Daniele Trebbi et al.   THEORETICAL AND APPLIED GENETICS

The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis

(2010) Runchun Jing et al.   BMC EVOLUTIONARY BIOLOGY

Comparing de novo assemblers for 454 transcriptome data

(2010) Sujai Kumar et al.   BMC GENOMICS

Highly-multiplexed SNP genotyping for genetic mapping and germplasm diversity studies in pea

(2010) Chrystel Deulvot et al.   BMC GENOMICS

Genome-wide patterns of genetic variation among elite maize inbred lines

(2010) Jinsheng Lai et al.   NATURE GENETICS

Development of highly polymorphic SNP markers from the complexity reduced portion of maize [Zea mays L.] genome for use in marker-assisted breeding

(2010) Jafar A. Mammadov et al.   THEORETICAL AND APPLIED GENETICS

SNP identification in crop plants

(2009) Martin W Ganal et al.   CURRENT OPINION IN PLANT BIOLOGY

Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing

(2009) Martin Trick et al.   PLANT BIOTECHNOLOGY JOURNAL

The 1001 Genomes Project for Arabidopsis thaliana

(2009) Detlef Weigel et al.   GENOME BIOLOGY

Quality scores and SNP detection in sequencing-by-synthesis systems

(2008) W. Brockman et al.   GENOME RESEARCH

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis

(2008) Petr Smýkal et al.   THEORETICAL AND APPLIED GENETICS

The flowering locus Hr colocalizes with a major QTL affecting winter frost tolerance in Pisum sativum L.

(2008) I. Lejeune-Hénaut et al.   THEORETICAL AND APPLIED GENETICS