Annual Protist Community Dynamics in a Freshwater Ecosystem Undergoing Contrasted Climatic Conditions: The Saint-Charles River (Canada)
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Title
Annual Protist Community Dynamics in a Freshwater Ecosystem Undergoing Contrasted Climatic Conditions: The Saint-Charles River (Canada)
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2019-10-16
DOI
10.3389/fmicb.2019.02359
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Note: Only part of the references are listed.- Annual bacterial community cycle in a seasonally ice-covered river reflects environmental and climatic conditions
- (2019) Perrine Cruaud et al. LIMNOLOGY AND OCEANOGRAPHY
- Use and abuse of correlation analyses in microbial ecology
- (2019) Alex Carr et al. ISME Journal
- Contrasting Winter Versus Summer Microbial Communities and Metabolic Functions in a Permafrost Thaw Lake
- (2019) Adrien Vigneron et al. Frontiers in Microbiology
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- (2018) Vesna Grujcic et al. ISME Journal
- Determining lineage-specific bacterial growth curves with a novel approach based on amplicon reads normalization using internal standard (ARNIS)
- (2018) Kasia Piwosz et al. ISME Journal
- Genome size of chrysophytes varies with cell size and nutritional mode
- (2018) Jana L. Olefeld et al. ORGANISMS DIVERSITY & EVOLUTION
- Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
- (2018) Yoann Seeleuthner et al. Nature Communications
- Dynamics and determinants of amoeba community, occurrence and abundance in subtropical reservoirs and rivers
- (2018) Kexin Ren et al. WATER RESEARCH
- Multiple Strategies for Light-Harvesting, Photoprotection, and Carbon Flow in High Latitude Microbial Mats
- (2018) Adrien Vigneron et al. Frontiers in Microbiology
- Autotrophic and heterotrophic acquisition of carbon and nitrogen by a mixotrophic chrysophyte established through stable isotope analysis
- (2017) Ramon Terrado et al. ISME Journal
- Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates
- (2017) Karel Šimek et al. LIMNOLOGY AND OCEANOGRAPHY
- Open the SterivexTM casing: An easy and effective way to improve DNA extraction yields
- (2017) Perrine Cruaud et al. LIMNOLOGY AND OCEANOGRAPHY-METHODS
- Seasonal Variation in Abundance and Diversity of Bacterial Methanotrophs in Five Temperate Lakes
- (2017) Md Sainur Samad et al. Frontiers in Microbiology
- High-throughput sequencing of multiple amplicons for barcoding and integrative taxonomy
- (2017) Perrine Cruaud et al. Scientific Reports
- Strong Seasonality of Marine Microbial Eukaryotes in a High-Arctic Fjord (Isfjorden, in West Spitsbergen, Norway)
- (2016) Miriam Marquardt et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Cellular adhesiveness and cellulolytic capacity in Anaerolineae revealed by omics-based genome interpretation
- (2016) Yu Xia et al. Biotechnology for Biofuels
- Ecology under lake ice
- (2016) Stephanie E. Hampton et al. ECOLOGY LETTERS
- Small but Manifold - Hidden Diversity in “Spumella-like Flagellates”
- (2016) Lars Grossmann et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Phenology of cryptomonads and the CRY1 lineage in a coastal brackish lagoon (Vistula Lagoon, Baltic Sea)
- (2016) Kasia Piwosz et al. JOURNAL OF PHYCOLOGY
- Mixotrophy in Heterocapsa rotundata : A mechanism for dominating the winter phytoplankton
- (2016) N. C. Millette et al. LIMNOLOGY AND OCEANOGRAPHY
- Expanded phylogenetic analyses of the class Heterotrichea (Ciliophora, Postciliodesmatophora) using five molecular markers and morphological data
- (2016) Noemi M. Fernandes et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
- (2016) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Photoregulation in a Kleptochloroplastidic Dinoflagellate, Dinophysis acuta
- (2016) Per J. Hansen et al. Frontiers in Microbiology
- Comparative Analysis of Membrane Lipids in Psychrophilic and Mesophilic Freshwater Dinoflagellates
- (2016) Andrea Anesi et al. Frontiers in Plant Science
- VSEARCH: a versatile open source tool for metagenomics
- (2016) Torbjørn Rognes et al. PeerJ
- dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering
- (2015) Tal Galili BIOINFORMATICS
- The ecology of pelagic freshwater methylotrophs assessed by a high-resolution monitoring and isolation campaign
- (2015) Michaela M Salcher et al. ISME Journal
- Marked seasonality and high spatial variability of protist communities in shallow freshwater systems
- (2015) Marianne Simon et al. ISME Journal
- Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes
- (2015) A. Z. Worden et al. SCIENCE
- Determinants of community structure in the global plankton interactome
- (2015) G. Lima-Mendez et al. SCIENCE
- Seasonal variation of planktonic chrysophytes with special focus on Dinobryon.
- (2015) Christina Bock et al. Fottea
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Diverse molecular signatures for ribosomally ‘active’ Perkinsea in marine sediments
- (2014) Aurélie Chambouvet et al. BMC MICROBIOLOGY
- Scale evolution in Paraphysomonadida (Chrysophyceae): Sequence phylogeny and revised taxonomy of Paraphysomonas, new genus Clathromonas, and 25 new species
- (2014) Josephine Margaret Scoble et al. EUROPEAN JOURNAL OF PROTISTOLOGY
- Single cell genome analysis of an uncultured heterotrophic stramenopile
- (2014) Rajat S. Roy et al. Scientific Reports
- Taxonomy and phylogeny of the genus Cryptomonas (Cryptophyceae, Cryptophyta) from Korea
- (2014) Bomi Choi et al. ALGAE
- Seasonality and disturbance: annual pattern and response of the bacterial and microbial eukaryotic assemblages in a freshwater ecosystem
- (2013) Adriane Clark Jones et al. ENVIRONMENTAL MICROBIOLOGY
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- (2013) Ramiro Logares et al. ENVIRONMENTAL MICROBIOLOGY
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- (2013) Karel Šimek et al. ISME Journal
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- (2013) Stefan Bertilsson et al. LIMNOLOGY AND OCEANOGRAPHY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Hydrurus-related golden algae (Chrysophyceae) cause yellow snow in polar summer snowfields
- (2013) Daniel Remias et al. PHYCOLOGICAL RESEARCH
- Phylogenetic Affiliation of SSU rRNA Genes Generated by Massively Parallel Sequencing: New Insights into the Freshwater Protist Diversity
- (2013) Najwa Taib et al. PLoS One
- Extremely High Copy Numbers and Polymorphisms of the rDNA Operon Estimated from Single Cell Analysis of Oligotrich and Peritrich Ciliates
- (2013) Jun Gong et al. PROTIST
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- (2012) Ulrich Sommer et al. Annual Review of Ecology Evolution and Systematics
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- (2012) DM Schoener et al. AQUATIC MICROBIAL ECOLOGY
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- (2012) Kazutaka Katoh et al. BIOINFORMATICS
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- (2012) Susanne Wilken et al. ECOLOGY LETTERS
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- (2012) Xavier Triadó-Margarit et al. ENVIRONMENTAL MICROBIOLOGY
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- (2012) Lindsay K. Newbold et al. ENVIRONMENTAL MICROBIOLOGY
- Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes
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- The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
- (2012) Laure Guillou et al. NUCLEIC ACIDS RESEARCH
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- (2012) Aitor Laza-Martínez et al. PHYCOLOGIA
- The Passive Yet Successful Way of Planktonic Life: Genomic and Experimental Analysis of the Ecology of a Free-Living Polynucleobacter Population
- (2012) Martin W. Hahn et al. PLoS One
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates
- (2011) Li C Xia et al. BMC Systems Biology
- Genetic diversity of picoeukaryotes in eight lakes differing in trophic status
- (2011) Biying Zhao et al. CANADIAN JOURNAL OF MICROBIOLOGY
- Winter ecology of shallow lakes: strongest effect of fish on water clarity at high nutrient levels
- (2011) Torben Sørensen et al. HYDROBIOLOGIA
- Hydrurus foetidus (Chromista, Chrysophyceae): A large freshwater chromophyte alga in laboratory culture
- (2011) Dag Klaveness et al. PHYCOLOGICAL RESEARCH
- Arctic Ocean Microbial Community Structure before and after the 2007 Record Sea Ice Minimum
- (2011) André M. Comeau et al. PLoS One
- Chrysophytes and other protists in High Arctic lakes: molecular gene surveys, pigment signatures and microscopy
- (2011) Sophie Charvet et al. POLAR BIOLOGY
- Telonemia-specific environmental 18S rDNA PCR reveals unknown diversity and multiple marine-freshwater colonizations
- (2010) Jon Bråte et al. BMC MICROBIOLOGY
- Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA
- (2010) Jon Bråte et al. ISME Journal
- Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity
- (2010) VIOLA NOLTE et al. MOLECULAR ECOLOGY
- The acquisition of phototrophy: adaptive strategies of hosting endosymbionts and organelles
- (2010) Matthew D. Johnson PHOTOSYNTHESIS RESEARCH
- Community Structure and Dynamics of Small Eukaryotes Targeted by New Oligonucleotide Probes: New Insight into the Lacustrine Microbial Food Web
- (2009) J.-F. Mangot et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Grazing rates and functional diversity of uncultured heterotrophic flagellates
- (2009) Ramon Massana et al. ISME Journal
- Unexpected Importance of Potential Parasites in the Composition of the Freshwater Small-Eukaryote Community
- (2008) C. Lepere et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR
- (2008) A. Godhe et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Diversification of unicellular eukaryotes: cryptomonad colonizations of marine and fresh waters inferred from revised 18S rRNA phylogeny
- (2008) Kamran Shalchian-Tabrizi et al. ENVIRONMENTAL MICROBIOLOGY
- Chloroplast DNA content inDinophysis(Dinophyceae) from different cell cycle stages is consistent with kleptoplasty
- (2008) Susanna Minnhagen et al. ENVIRONMENTAL MICROBIOLOGY
- Protists are microbes too: a perspective
- (2008) David A Caron et al. ISME Journal
- High bacterivory by the smallest phytoplankton in the North Atlantic Ocean
- (2008) Mikhail V. Zubkov et al. NATURE
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