Open the SterivexTM casing: An easy and effective way to improve DNA extraction yields

Rainfall increases the abundance of antibiotic resistance genes within a riverine microbial community

(2017) Andrea Di Cesare et al.   ENVIRONMENTAL POLLUTION

Standardization of DNA extraction from sand flies: Application to genotyping by next generation sequencing

(2017) Aline Etelvina Casaril et al.   EXPERIMENTAL PARASITOLOGY

High-throughput sequencing of multiple amplicons for barcoding and integrative taxonomy

(2017) Perrine Cruaud et al.   Scientific Reports

Comparison of capture and storage methods for aqueous macrobial eDNA using an optimized extraction protocol: advantage of enclosed filter

(2016) Johan Spens et al.   Methods in Ecology and Evolution

Distinct Spatial Patterns of SAR11, SAR86, and Actinobacteria Diversity along a Transect in the Ultra-oligotrophic South Pacific Ocean

(2016) Nyree J. West et al.   Frontiers in Microbiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Wind and sunlight shape microbial diversity in surface waters of the North Pacific Subtropical Gyre

(2015) Jessica A Bryant et al.   ISME Journal

Size-fraction partitioning of community gene transcription and nitrogen metabolism in a marine oxygen minimum zone

(2015) Sangita Ganesh et al.   ISME Journal

Orchestrating high-throughput genomic analysis with Bioconductor

(2015) Wolfgang Huber et al.   NATURE METHODS

Species sorting and seasonal dynamics primarily shape bacterial communities in the Upper Mississippi River

(2015) Christopher Staley et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bacterial community structure across environmental gradients in permafrost thaw ponds: methanotroph-rich ecosystems

(2015) Sophie Crevecoeur et al.   Frontiers in Microbiology

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition

(2014) Yan Wei Lim et al.   PeerJ

Phylogenetic diversity and functional gene patterns of sulfur-oxidizing subseafloor Epsilonproteobacteria in diffuse hydrothermal vent fluids

(2013) Nancy H. Akerman et al.   Frontiers in Microbiology

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

(2011) Daniel PR Herlemann et al.   ISME Journal

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY