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Title
Domainoid: domain-oriented orthology inference
Authors
Keywords
-
Journal
BMC BIOINFORMATICS
Volume 20, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-10-28
DOI
10.1186/s12859-019-3137-2
References
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Related references
Note: Only part of the references are listed.- Singularity: Scientific containers for mobility of compute
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- (2014) E. L. L. Sonnhammer et al. BIOINFORMATICS
- The OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements
- (2014) Adrian M. Altenhoff et al. NUCLEIC ACIDS RESEARCH
- MBGD update 2015: microbial genome database for flexible ortholog analysis utilizing a diverse set of genomic data
- (2014) Ikuo Uchiyama et al. NUCLEIC ACIDS RESEARCH
- InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic
- (2014) Erik L.L. Sonnhammer et al. NUCLEIC ACIDS RESEARCH
- Functional and evolutionary implications of gene orthology
- (2013) Toni Gabaldón et al. NATURE REVIEWS GENETICS
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Toward community standards in the quest for orthologs
- (2012) C. Dessimoz et al. BIOINFORMATICS
- Resolving the Ortholog Conjecture: Orthologs Tend to Be Weakly, but Significantly, More Similar in Function than Paralogs
- (2012) Adrian M. Altenhoff et al. PLoS Computational Biology
- Domain architecture conservation in orthologs
- (2011) Kristoffer Forslund et al. BMC BIOINFORMATICS
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- Berkeley PHOG: PhyloFacts orthology group prediction web server
- (2009) Ruchira S. Datta et al. NUCLEIC ACIDS RESEARCH
- Sequence Similarity Network Reveals Common Ancestry of Multidomain Proteins
- (2008) Nan Song et al. PLoS Computational Biology
- Domain Tree-Based Analysis of Protein Architecture Evolution
- (2007) K. Forslund et al. MOLECULAR BIOLOGY AND EVOLUTION
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