Edge-based sensitivity analysis of signaling networks by using Boolean dynamics
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Edge-based sensitivity analysis of signaling networks by using Boolean dynamics
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 32, Issue 17, Pages i763-i771
Publisher
Oxford University Press (OUP)
Online
2016-09-01
DOI
10.1093/bioinformatics/btw464
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Dynamical Robustness against Multiple Mutations in Signaling Networks
- (2016) Yung-Keun Kwon et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- Tumor suppressive functions of ceramide: evidence and mechanisms
- (2015) Sehamuddin Galadari et al. APOPTOSIS
- Effective Boolean dynamics analysis to identify functionally important genes in large-scale signaling networks
- (2015) Hung-Cuong Trinh et al. BIOSYSTEMS
- Targeting the MDM2/MDM4 Interaction Interface as a Promising Approach for p53 Reactivation Therapy
- (2015) Marsha Pellegrino et al. CANCER RESEARCH
- Widespread Macromolecular Interaction Perturbations in Human Genetic Disorders
- (2015) Nidhi Sahni et al. CELL
- Exploring the relationship between hub proteins and drug targets based on GO and intrinsic disorder
- (2015) Yuanyuan Fu et al. COMPUTATIONAL BIOLOGY AND CHEMISTRY
- Revisiting the sphingolipid rheostat: Evolving concepts in cancer therapy
- (2015) Jason Newton et al. EXPERIMENTAL CELL RESEARCH
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- SIGNOR: a database of causal relationships between biological entities
- (2015) Livia Perfetto et al. NUCLEIC ACIDS RESEARCH
- The Reactome pathway Knowledgebase
- (2015) Antonio Fabregat et al. NUCLEIC ACIDS RESEARCH
- Targeting RING domains of Mdm2–MdmX E3 complex activates apoptotic arm of the p53 pathway in leukemia/lymphoma cells
- (2015) W Wu et al. Cell Death & Disease
- Inference of Network Dynamics and Metabolic Interactions in the Gut Microbiome
- (2015) Steven N. Steinway et al. PLoS Computational Biology
- Analysis of Individual Protein Regions Provides Novel Insights on Cancer Pharmacogenomics
- (2015) Eduard Porta Pardo et al. PLoS Computational Biology
- Robustness of Oscillatory Behavior in Correlated Networks
- (2015) Takeyuki Sasai et al. PLoS One
- Global dynamic optimization approach to predict activation in metabolic pathways
- (2014) Gundián M de Hijas-Liste et al. BMC Systems Biology
- Comprehensive analysis of microRNA-regulated protein interaction network reveals the tumor suppressive role of microRNA-149 in human hepatocellular carcinoma via targeting AKT-mTOR pathway
- (2014) Yanqiong Zhang et al. Molecular Cancer
- Graph analysis of functional brain networks: practical issues in translational neuroscience
- (2014) F. De Vico Fallani et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- PANET: A GPU-Based Tool for Fast Parallel Analysis of Robustness Dynamics and Feed-Forward/Feedback Loop Structures in Large-Scale Biological Networks
- (2014) Hung-Cuong Trinh et al. PLoS One
- Construction and Analysis of the Protein-Protein Interaction Networks Based on Gene Expression Profiles of Parkinson's Disease
- (2014) Hindol Rakshit et al. PLoS One
- Positive Feedback Promotes Oscillations in Negative Feedback Loops
- (2014) Bharath Ananthasubramaniam et al. PLoS One
- Hot spots in protein–protein interfaces: Towards drug discovery
- (2014) Engin Cukuroglu et al. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY
- A Network Characteristic That Correlates Environmental and Genetic Robustness
- (2014) Zeina Shreif et al. PLoS Computational Biology
- Robustness and Evolvability of the Human Signaling Network
- (2014) Junil Kim et al. PLoS Computational Biology
- NOA: a cytoscape plugin for network ontology analysis
- (2013) Chao Zhang et al. BIOINFORMATICS
- DrugBank 4.0: shedding new light on drug metabolism
- (2013) Vivian Law et al. NUCLEIC ACIDS RESEARCH
- Mutations that disrupt PHOXB interaction with the neuronal calcium sensor HPCAL1 impede cellular differentiation in neuroblastoma
- (2013) W Wang et al. ONCOGENE
- Three-dimensional reconstruction of protein networks provides insight into human genetic disease
- (2012) Xiujuan Wang et al. NATURE BIOTECHNOLOGY
- The effects of feedback loops on disease comorbidity in human signaling networks
- (2011) Duc-Hau Le et al. BIOINFORMATICS
- NOA: a novel Network Ontology Analysis method
- (2011) Jiguang Wang et al. NUCLEIC ACIDS RESEARCH
- The p53 inhibitors MDM2/MDMX complex is required for control of p53 activity in vivo
- (2011) L. Huang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Reduction of Complex Signaling Networks to a Representative Kernel
- (2011) J.-R. Kim et al. Science Signaling
- Dynamical and Structural Analysis of a T Cell Survival Network Identifies Novel Candidate Therapeutic Targets for Large Granular Lymphocyte Leukemia
- (2011) Assieh Saadatpour et al. PLoS Computational Biology
- Integrated Genome-Scale Prediction of Detrimental Mutations in Transcription Networks
- (2011) Mirko Francesconi et al. PLoS Genetics
- Identification of potential targets in biological signalling systems through network perturbation analysis
- (2010) Francisco Azuaje et al. BIOSYSTEMS
- Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling
- (2010) Aurélien Naldi et al. PLoS Computational Biology
- Protein evolution on a human signaling network
- (2009) Qinghua Cui et al. BMC Systems Biology
- Coherent coupling of feedback loops: a design principle of cell signaling networks
- (2008) Yung-Keun Kwon et al. BIOINFORMATICS
- Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics
- (2008) Yung-Keun Kwon et al. BIOINFORMATICS
- Molecular profiling of LGL leukemia reveals role of sphingolipid signaling in survival of cytotoxic lymphocytes
- (2008) M. V. Shah et al. BLOOD
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now