Graph analysis of functional brain networks: practical issues in translational neuroscience

A wavelet method for modeling and despiking motion artifacts from resting-state fMRI time series

(2014) Ameera X. Patel et al.   NEUROIMAGE

Nonparametric resampling of random walks for spectral network clustering

(2014) Fabrizio De Vico Fallani et al.   PHYSICAL REVIEW E

Functional Connectivity and Brain Networks in Schizophrenia

(2013) M.-E. Lynall et al.   JOURNAL OF NEUROSCIENCE

Functional connectivity and graph theory in preclinical Alzheimer's disease

(2013) Matthew R. Brier et al.   NEUROBIOLOGY OF AGING

The effect of scan length on the reliability of resting-state fMRI connectivity estimates

(2013) Rasmus M. Birn et al.   NEUROIMAGE

PHYCAA+: An optimized, adaptive procedure for measuring and controlling physiological noise in BOLD fMRI

(2013) Nathan W. Churchill et al.   NEUROIMAGE

Multiscale topological properties of functional brain networks during motor imagery after stroke

(2013) Fabrizio De Vico Fallani et al.   NEUROIMAGE

Clinical applications of the functional connectome

(2013) F. Xavier Castellanos et al.   NEUROIMAGE

Total activation: fMRI deconvolution through spatio-temporal regularization

(2013) Fikret Işık Karahanoğlu et al.   NEUROIMAGE

Resting-state fMRI confounds and cleanup

(2013) Kevin Murphy et al.   NEUROIMAGE

A note on the phase locking value and its properties

(2013) Sergul Aydore et al.   NEUROIMAGE

The parcellation-based connectome: Limitations and extensions

(2013) Marcel A. de Reus et al.   NEUROIMAGE

Graph analysis of the human connectome: Promise, progress, and pitfalls

(2013) Alex Fornito et al.   NEUROIMAGE

Methods to detect, characterize, and remove motion artifact in resting state fMRI

(2013) Jonathan D. Power et al.   NEUROIMAGE

A review on continuous wave functional near-infrared spectroscopy and imaging instrumentation and methodology

(2013) Felix Scholkmann et al.   NEUROIMAGE

Statistical analysis of fNIRS data: A comprehensive review

(2013) Sungho Tak et al.   NEUROIMAGE

Node Accessibility in Cortical Networks During Motor Tasks

(2013) Mario Chavez et al.   NEUROINFORMATICS

Evidence for Hubs in Human Functional Brain Networks

(2013) Jonathan D. Power et al.   NEURON

Bootstrapping under constraint for the assessment of group behavior in human contact networks

(2013) Nicolas Tremblay et al.   PHYSICAL REVIEW E

Measuring Information-Transfer Delays

(2013) Michael Wibral et al.   PLoS One

The Problem of Thresholding in Small-World Network Analysis

(2013) Nicolas Langer et al.   PLoS One

Influence of Choice of Null Network on Small-World Parameters of Structural Correlation Networks

(2013) S. M. Hadi Hosseini et al.   PLoS One

Integrated strategy for improving functional connectivity mapping using multiecho fMRI

(2013) P. Kundu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural and Functional Brain Networks: From Connections to Cognition

(2013) H.-J. Park et al.   SCIENCE

The Anatomical Distance of Functional Connections Predicts Brain Network Topology in Health and Schizophrenia

(2012) Aaron F. Alexander-Bloch et al.   CEREBRAL CORTEX

The organization of physiological brain networks

(2012) C.J. Stam et al.   CLINICAL NEUROPHYSIOLOGY

REDUNDANCY IN FUNCTIONAL BRAIN CONNECTIVITY FROM EEG RECORDINGS

(2012) FABRIZIO DE VICO FALLANI et al.   INTERNATIONAL JOURNAL OF BIFURCATION AND CHAOS

Monitoring spike train synchrony

(2012) Thomas Kreuz et al.   JOURNAL OF NEUROPHYSIOLOGY

Large-Scale Correlation Screening

(2012) Alfred Hero et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

A method to determine the necessity for global signal regression in resting-state fMRI studies

(2012) Gang Chen et al.   MAGNETIC RESONANCE IN MEDICINE

Large-scale cortical correlation structure of spontaneous oscillatory activity

(2012) Joerg F Hipp et al.   NATURE NEUROSCIENCE

Schizophrenia, neuroimaging and connectomics

(2012) Alex Fornito et al.   NEUROIMAGE

On the use of correlation as a measure of network connectivity

(2012) Andrew Zalesky et al.   NEUROIMAGE

Why use a connectivity-based approach to study stroke and recovery of function?

(2012) Alex R. Carter et al.   NEUROIMAGE

A novel approach for global noise reduction in resting-state fMRI: APPLECOR

(2012) Michael Marx et al.   NEUROIMAGE

An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data

(2012) Theodore D. Satterthwaite et al.   NEUROIMAGE

The Brain Activity Map Project and the Challenge of Functional Connectomics

(2012) A. Paul Alivisatos et al.   NEURON

Predicting Regional Neurodegeneration from the Healthy Brain Functional Connectome

(2012) Juan Zhou et al.   NEURON

Temporal networks

(2012) Petter Holme et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Predicting errors from reconfiguration patterns in human brain networks

(2012) M. Ekman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hubs of brain functional networks are radically reorganized in comatose patients

(2012) S. Achard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Optimizing Functional Network Representation of Multivariate Time Series

(2012) Massimiliano Zanin et al.   Scientific Reports

Brain Graphs: Graphical Models of the Human Brain Connectome

(2011) Edward T. Bullmore et al.   Annual Review of Clinical Psychology

Reorganization of cerebral networks after stroke: new insights from neuroimaging with connectivity approaches

(2011) C. Grefkes et al.   BRAIN

Review of advanced techniques for the estimation of brain connectivity measured with EEG/MEG

(2011) V. Sakkalis   COMPUTERS IN BIOLOGY AND MEDICINE

Cognitive Effort Drives Workspace Configuration of Human Brain Functional Networks

(2011) M. G. Kitzbichler et al.   JOURNAL OF NEUROSCIENCE

Impaired cerebral vasoreactivity to CO2 in Alzheimer's disease using BOLD fMRI

(2011) S. Cantin et al.   NEUROIMAGE

An improved index of phase-synchronization for electrophysiological data in the presence of volume-conduction, noise and sample-size bias

(2011) Martin Vinck et al.   NEUROIMAGE

Weight-conserving characterization of complex functional brain networks

(2011) Mikail Rubinov et al.   NEUROIMAGE

A tutorial in connectome analysis: Topological and spatial features of brain networks

(2011) Marcus Kaiser   NEUROIMAGE

Task-driven ICA feature generation for accurate and interpretable prediction using fMRI

(2011) Eugene P. Duff et al.   NEUROIMAGE

Altered resting state complexity in schizophrenia

(2011) Danielle S. Bassett et al.   NEUROIMAGE

Anticorrelations in resting state networks without global signal regression

(2011) Xiaoqian J. Chai et al.   NEUROIMAGE

Anticorrelated resting-state functional connectivity in awake rat brain

(2011) Zhifeng Liang et al.   NEUROIMAGE

Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion

(2011) Jonathan D. Power et al.   NEUROIMAGE

Adaptive Strategy for the Statistical Analysis of Connectomes

(2011) Djalel Eddine Meskaldji et al.   PLoS One

Brain Network Analysis: Separating Cost from Topology Using Cost-Integration

(2011) Cedric E. Ginestet et al.   PLoS One

Dynamic reconfiguration of human brain networks during learning

(2011) D. S. Bassett et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Let there be light: zebrafish neurobiology and the optogenetic revolution

(2011) Claire Wyart et al.   REVIEWS IN THE NEUROSCIENCES

Dynamic functional reorganization of the motor execution network after stroke

(2010) Liang Wang et al.   BRAIN

Graph analysis of epileptogenic networks in human partial epilepsy

(2010) Christopher Wilke et al.   EPILEPSIA

On directed information theory and Granger causality graphs

(2010) Pierre-Olivier Amblard et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Impaired Efficiency of Functional Networks Underlying Episodic Memory-for-Context in Schizophrenia

(2010) L. Wang et al.   JOURNAL OF NEUROSCIENCE

Graph theoretical analysis of structural and functional connectivity MRI in normal and pathological brain networks

(2010) Maxime Guye et al.   MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE

Estimating complex cortical networks via surface recordings—A critical note

(2010) Lucas Antiqueira et al.   NEUROIMAGE

Functional connectivity as revealed by independent component analysis of resting-state fNIRS measurements

(2010) Han Zhang et al.   NEUROIMAGE

Network-based statistic: Identifying differences in brain networks

(2010) Andrew Zalesky et al.   NEUROIMAGE

Nonlinear connectivity by Granger causality

(2010) Daniele Marinazzo et al.   NEUROIMAGE

A big-world network in ASD: Dynamical connectivity analysis reflects a deficit in long-range connections and an excess of short-range connections

(2010) Pablo Barttfeld et al.   NEUROPSYCHOLOGIA

Small-world behavior in time-varying graphs

(2010) J. Tang et al.   PHYSICAL REVIEW E

Functional Modularity of Background Activities in Normal and Epileptic Brain Networks

(2010) M. Chavez et al.   PHYSICAL REVIEW LETTERS

Spatial networks

(2010) Marc Barthélemy   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

A New Measure of Centrality for Brain Networks

(2010) Karen E. Joyce et al.   PLoS One

Comparing Brain Networks of Different Size and Connectivity Density Using Graph Theory

(2010) Bernadette C. M. van Wijk et al.   PLoS One

Human functional connectivity: New tools, unresolved questions

(2010) R. L. Buckner   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community Structure in Time-Dependent, Multiscale, and Multiplex Networks

(2010) P. J. Mucha et al.   SCIENCE

Human brain networks in health and disease

(2009) Danielle S Bassett et al.   CURRENT OPINION IN NEUROLOGY

Curing epilepsy: Progress and future directions

(2009) Margaret P. Jacobs et al.   EPILEPSY & BEHAVIOR

Functional segmentation of the brain cortex using high model order group PICA

(2009) Vesa Kiviniemi et al.   HUMAN BRAIN MAPPING

Source connectivity analysis with MEG and EEG

(2009) Jan-Mathijs Schoffelen et al.   HUMAN BRAIN MAPPING

Equal numbers of neuronal and nonneuronal cells make the human brain an isometrically scaled-up primate brain

(2009) Frederico A.C. Azevedo et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Complex brain networks: graph theoretical analysis of structural and functional systems

(2009) Ed Bullmore et al.   NATURE REVIEWS NEUROSCIENCE

Correlations and anticorrelations in resting-state functional connectivity MRI: A quantitative comparison of preprocessing strategies

(2009) Andreas Weissenbacher et al.   NEUROIMAGE

Whole-brain anatomical networks: Does the choice of nodes matter?

(2009) Andrew Zalesky et al.   NEUROIMAGE

Comparison of characteristics between region-and voxel-based network analyses in resting-state fMRI data

(2009) Satoru Hayasaka et al.   NEUROIMAGE

Complex network measures of brain connectivity: Uses and interpretations

(2009) Mikail Rubinov et al.   NEUROIMAGE

The Brain's Default Network

(2008) Randy L. Buckner et al.   Annals of the New York Academy of Sciences

Disrupted small-world networks in schizophrenia

(2008) Yong Liu et al.   BRAIN

Complexity in biology. Exceeding the limits of reductionism and determinism using complexity theory

(2008) Fulvio Mazzocchi   EMBO REPORTS

Partial Granger causality—Eliminating exogenous inputs and latent variables

(2008) Shuixia Guo et al.   JOURNAL OF NEUROSCIENCE METHODS

Lesion identification using unified segmentation-normalisation models and fuzzy clustering

(2008) Mohamed L. Seghier et al.   NEUROIMAGE

Small-world and scale-free organization of voxel-based resting-state functional connectivity in the human brain

(2008) M.P. van den Heuvel et al.   NEUROIMAGE

Age-related changes in modular organization of human brain functional networks

(2008) David Meunier et al.   NEUROIMAGE

The impact of global signal regression on resting state correlations: Are anti-correlated networks introduced?

(2008) Kevin Murphy et al.   NEUROIMAGE

Cortical Network Dynamics during Foot Movements

(2008) Fabrizio De Vico Fallani et al.   NEUROINFORMATICS

Fractal connectivity of long-memory networks

(2008) Sophie Achard et al.   PHYSICAL REVIEW E

Dynamic small-world behavior in functional brain networks unveiled by an event-related networks approach

(2008) M. Valencia et al.   PHYSICAL REVIEW E

Network Analysis of Intrinsic Functional Brain Connectivity in Alzheimer's Disease

(2008) Kaustubh Supekar et al.   PLoS Computational Biology

Automatic independent component labeling for artifact removal in fMRI

(2007) Jussi Tohka et al.   NEUROIMAGE

A simple view of the brain through a frequency-specific functional connectivity measure

(2007) R. Salvador et al.   NEUROIMAGE

A method for functional network connectivity among spatially independent resting-state components in schizophrenia

(2007) Madiha J. Jafri et al.   NEUROIMAGE

Automatic segmentation of brain MRIs of 2-year-olds into 83 regions of interest

(2007) Ioannis S. Gousias et al.   NEUROIMAGE