Genome-Wide Association Mapping and Genomic Prediction Analyses Reveal the Genetic Architecture of Grain Yield and Flowering Time Under Drought and Heat Stress Conditions in Maize

Developing and deploying climate-resilient maize varieties in the developing world

(2018) Jill E Cairns et al.   CURRENT OPINION IN PLANT BIOLOGY

Genomic Selection Outperforms Marker Assisted Selection for Grain Yield and Physiological Traits in a Maize Doubled Haploid Population Across Water Treatments

(2018) Diego Cerrudo et al.   Frontiers in Plant Science

Dissecting heat stress tolerance in tropical maize ( Zea mays L.)

(2017) Md Ashraful Alam et al.   FIELD CROPS RESEARCH

Natural antisense transcripts are significantly involved in regulation of drought stress in maize

(2017) Jie Xu et al.   NUCLEIC ACIDS RESEARCH

Rapid Cycling Genomic Selection in a Multiparental Tropical Maize Population

(2017) Xuecai Zhang et al.   G3-Genes Genomes Genetics

Genome-Wide Analysis of Tar Spot Complex Resistance in Maize Using Genotyping-by-Sequencing SNPs and Whole-Genome Prediction

(2017) Shiliang Cao et al.   Plant Genome

Use of Genomic Estimated Breeding Values Results in Rapid Genetic Gains for Drought Tolerance in Maize

(2017) B.S. Vivek et al.   Plant Genome

Effect of Trait Heritability, Training Population Size and Marker Density on Genomic Prediction Accuracy Estimation in 22 bi-parental Tropical Maize Populations

(2017) Ao Zhang et al.   Frontiers in Plant Science

Rapid breeding and varietal replacement are critical to adaptation of cropping systems in the developing world to climate change

(2017) Gary N. Atlin et al.   Global Food Security-Agriculture Policy Economics and Environment

Numerous genetic loci identified for drought tolerance in the maize nested association mapping populations

(2016) Chunhui Li et al.   BMC GENOMICS

Genetic architecture of the maize kernel row number revealed by combining QTL mapping using a high-density genetic map and bulked segregant RNA sequencing

(2016) Changlin Liu et al.   BMC GENOMICS

Genome-wide Association for Plant Height and Flowering Time across 15 Tropical Maize Populations under Managed Drought Stress and Well-Watered Conditions in Sub-Saharan Africa

(2016) Jason G. Wallace et al.   CROP SCIENCE

Molecular characterization of CIMMYT maize inbred lines with genotyping-by-sequencing SNPs

(2016) Yongsheng Wu et al.   THEORETICAL AND APPLIED GENETICS

Current warming will reduce yields unless maize breeding and seed systems adapt immediately

(2016) A. J. Challinor et al.   Nature Climate Change

Genome-wide association mapping reveals novel sources of resistance to northern corn leaf blight in maize

(2015) Junqiang Ding et al.   BMC PLANT BIOLOGY

Genetic Gains in Grain Yield Through Genomic Selection in Eight Bi-parental Maize Populations under Drought Stress

(2015) Yoseph Beyene et al.   CROP SCIENCE

Functional mechanisms of drought tolerance in subtropical maize (Zea mays L.) identified using genome-wide association mapping

(2015) Nepolean Thirunavukkarasu et al.   BMC GENOMICS

Novel Methods to Optimize Genotypic Imputation for Low-Coverage, Next-Generation Sequence Data in Crop Plants

(2015) Kelly Swarts et al.   Plant Genome

Modern maize varieties going local in the semi-arid zone in Tanzania

(2014) Ola T Westengen et al.   BMC EVOLUTIONARY BIOLOGY

Identification of candidate genes for drought tolerance by whole-genome resequencing in maize

(2014) Jie Xu et al.   BMC PLANT BIOLOGY

Genomic prediction in biparental tropical maize populations in water-stressed and well-watered environments using low-density and GBS SNPs

(2014) X Zhang et al.   HEREDITY

Insights into the Maize Pan-Genome and Pan-Transcriptome

(2014) C. N. Hirsch et al.   PLANT CELL

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

QTL Analysis of Kernel-Related Traits in Maize Using an Immortalized F2 Population

(2014) Zhanhui Zhang et al.   PLoS One

A SUPER Powerful Method for Genome Wide Association Study

(2014) Qishan Wang et al.   PLoS One

Predicting the future of plant breeding: complementing empirical evaluation with genetic prediction

(2014) Mark Cooper et al.   Crop & Pasture Science

Meta-analyses of QTL for grain yield and anthesis silking interval in 18 maize populations evaluated under water-stressed and well-watered environments

(2013) Kassa Semagn et al.   BMC GENOMICS

Identification of Drought, Heat, and Combined Drought and Heat Tolerant Donors in Maize

(2013) Jill E. Cairns et al.   CROP SCIENCE

Genome-wide association analysis for nine agronomic traits in maize under well-watered and water-stressed conditions

(2013) Yadong Xue et al.   THEORETICAL AND APPLIED GENETICS

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

A Gene Regulatory Network Model for Floral Transition of the Shoot Apex in Maize and Its Dynamic Modeling

(2012) Zhanshan Dong et al.   PLoS One

QTL mapping in three tropical maize populations reveals a set of constitutive and adaptive genomic regions for drought tolerance

(2012) Gustavo Dias Almeida et al.   THEORETICAL AND APPLIED GENETICS

Molecular Characterization of a Diverse Maize Inbred Line Collection and its Potential Utilization for Stress Tolerance Improvement

(2011) Weiwei Wen et al.   CROP SCIENCE

FaST linear mixed models for genome-wide association studies

(2011) Christoph Lippert et al.   NATURE METHODS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

Joint linkage-linkage disequilibrium mapping is a powerful approach to detecting quantitative trait loci underlying drought tolerance in maize

(2010) Y. Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Two consensus quantitative trait loci clusters controlling anthesis-silking interval, ear setting and grain yield might be related with drought tolerance in maize

(2008) Z.F. Hao et al.   ANNALS OF APPLIED BIOLOGY