Transcriptome analysis provides insights into the stress response crosstalk in apple (Malus × domestica) subjected to drought, cold and high salinity

Identification of wheat stress-responding genes and TaPR-1-1 function by screening a cDNA yeast library prepared following abiotic stress

(2019) Jingyi Wang et al.   Scientific Reports

Transcriptome analysis of grapevine under salinity and identification of key genes responsible for salt tolerance

(2018) Priyanka Das et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Transcriptomic responses to biotic stresses in Malus x domestica: a meta-analysis study

(2018) Bipin Balan et al.   Scientific Reports

Comparative genomic and transcriptomic analyses of Family-1 UDP glycosyltransferase in three Brassica species and Arabidopsis indicates stress-responsive regulation

(2018) Hafiz Mamoon Rehman et al.   Scientific Reports

Influence of six dwarfing interstocks on the ‘Fuji’ apple under drought stress

(2017) X.L. Li et al.   Indian Journal of Horticulture

Transcriptome Sequencing of Dianthus spiculifolius and Analysis of the Genes Involved in Responses to Combined Cold and Drought Stress

(2017) Aimin Zhou et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Emerging roles for ROS and RNS – versatile molecules in plants

(2017) Ismail Turkan   JOURNAL OF EXPERIMENTAL BOTANY

ACCERBATIN, a small molecule at the intersection of auxin and reactive oxygen species homeostasis with herbicidal properties

(2017) Yuming Hu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide analysis of antioxidant enzyme gene families involved in drought and low-temperature responses in Apple (Malus domestica)

(2017) Xing-Liang Li et al.   JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY

Overexpression of a Camellia sinensis DREB transcription factor gene (CsDREB) increases salt and drought tolerance in transgenic Arabidopsis thaliana

(2017) Mingle Wang et al.   JOURNAL OF PLANT BIOLOGY

Transcriptome analysis around the onset of strawberry fruit ripening uncovers an important role of oxidative phosphorylation in ripening

(2017) Qing-Hua Wang et al.   Scientific Reports

Global Gene Expression Analysis Reveals Crosstalk between Response Mechanisms to Cold and Drought Stresses in Cassava Seedlings

(2017) Shuxia Li et al.   Frontiers in Plant Science

Multilevel Regulation of Abiotic Stress Responses in Plants

(2017) David C. Haak et al.   Frontiers in Plant Science

Functional analysis of CsCBF3 transcription factor in tea plant (Camellia sinensis) under cold stress

(2016) Ying Yin et al.   PLANT GROWTH REGULATION

Apple (Malus domestica) MdERF2 negatively affects ethylene biosynthesis during fruit ripening by suppressingMdACS1transcription

(2016) Tong Li et al.   PLANT JOURNAL

Transcriptome analysis of Arabidopsis mutants suggests a crosstalk between ABA, ethylene and GSH against combined cold and osmotic stress

(2016) Deepak Kumar et al.   Scientific Reports

Transcription profiling of the chilling requirement for bud break in apples: a putative role for FLC-like genes

(2015) Diogo Denardi Porto et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome analysis of an apple (Malus×domestica) yellow fruit somatic mutation identifies a gene network module highly associated with anthocyanin and epigenetic regulation

(2015) Islam El-Sharkawy et al.   JOURNAL OF EXPERIMENTAL BOTANY

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Transcription Profiles Reveal Sugar and Hormone Signaling Pathways Mediating Flower Induction in Apple (Malus domesticaBorkh.)

(2015) Li-Bo Xing et al.   PLANT AND CELL PHYSIOLOGY

Analyzing the Expression Profile of AREB/ABF and DREB/CBF Genes under Drought and Salinity Stresses in Grape (Vitis vinifera L.)

(2015) Hana Zandkarimi et al.   PLoS One

Comparative transcriptome profiling of a desert evergreen shrub, Ammopiptanthus mongolicus, in response to drought and cold stresses

(2014) Yaqi Wu et al.   BMC GENOMICS

Transcriptomic events associated with internal browning of apple during postharvest storage

(2014) Ifigeneia Mellidou et al.   BMC PLANT BIOLOGY

The identification of novel and differentially expressed apple-tree genes under low-temperature stress using high-throughput Illumina sequencing

(2014) Fan Du et al.   MOLECULAR BIOLOGY REPORTS

Phytohormones and plant responses to salinity stress: a review

(2014) Shah Fahad et al.   PLANT GROWTH REGULATION

Response to drought and salt stress in leaves of poplar ( Populus alba  ×  Populus glandulosa ): Expression profiling by oligonucleotide microarray analysis

(2014) Seo-Kyung Yoon et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Transcriptome Analysis Reveals Genes Commonly Induced by Botrytis cinerea Infection, Cold, Drought and Oxidative Stresses in Arabidopsis

(2014) Arjun Sham et al.   PLoS One

The Salt Overly Sensitive (SOS) Pathway: Established and Emerging Roles

(2013) Hongtao Ji et al.   Molecular Plant

Transcriptome Profile Analysis of Maize Seedlings in Response to High-salinity, Drought and Cold Stresses by Deep Sequencing

(2013) Xiaohui Shan et al.   PLANT MOLECULAR BIOLOGY REPORTER

Molecular characterization of an ABA insensitive 5 orthologue in Brassica oleracea

(2012) Xiaona Zhou et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Improvement of drought and salt tolerance in Arabidopsis and Lotus corniculatus by overexpression of a novel DREB transcription factor from Populus euphratica

(2012) Mei-Liang Zhou et al.   GENE

The bHLH transcription factor MdbHLH3 promotes anthocyanin accumulation and fruit colouration in response to low temperature in apples

(2012) XING-BIN XIE et al.   PLANT CELL AND ENVIRONMENT

Signal transduction during cold, salt, and drought stresses in plants

(2011) Guo-Tao Huang et al.   MOLECULAR BIOLOGY REPORTS

Analysis of the NAC transcription factor gene family in citrus reveals a novel member involved in multiple abiotic stress responses

(2011) Tahise M. de Oliveira et al.   Tree Genetics & Genomes

Use of homologous and heterologous gene expression profiling tools to characterize transcription dynamics during apple fruit maturation and ripening

(2010) Fabrizio Costa et al.   BMC PLANT BIOLOGY

Overexpression of a Malus vacuolar Na+/H+ antiporter gene (MdNHX1) in apple rootstock M.26 and its influence on salt tolerance

(2010) Yonghong Li et al.   PLANT CELL TISSUE AND ORGAN CULTURE

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis

(2008) Tongtong Xue et al.   BMC GENOMICS

Arabidopsis Transcriptome Analysis under Drought, Cold, High-Salinity and ABA Treatment Conditions using a Tiling Array

(2008) A. Matsui et al.   PLANT AND CELL PHYSIOLOGY