Expanding the Diversity of Myoviridae Phages Infecting Lactobacillus plantarum—A Novel Lineage of Lactobacillus Phages Comprising Five New Members

Phages as friends and enemies in food processing

(2018) Alessandra Gonçalves de Melo et al.   CURRENT OPINION IN BIOTECHNOLOGY

Monitoring Viable Cells of the Biological Control Agent Lactobacillus plantarum PM411 in Aerial Plant Surfaces by Means of a Strain-Specific Viability Quantitative PCR Method

(2018) Núria Daranas et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genes for Membrane Transport Proteins: Not So Rare in Viruses

(2018) Timo Greiner et al.   Viruses-Basel

High abundance and expression of transposases in bacteria from the Baltic Sea

(2017) Theoden Vigil-Stenman et al.   ISME Journal

Vibrio Phage KVP40 Encodes a Functional NAD + Salvage Pathway

(2017) Jae Yun Lee et al.   JOURNAL OF BACTERIOLOGY

From yogurt to yield: Potential applications of lactic acid bacteria in plant production

(2017) John R. Lamont et al.   SOIL BIOLOGY & BIOCHEMISTRY

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

(2017) Ryan R. Wick et al.   PLoS Computational Biology

The first characterized phage against a member of the ecologically important sphingomonads reveals high dissimilarity against all other known phages

(2017) Tue Kjærgaard Nielsen et al.   Scientific Reports

Characterisation of a novel enterobacteria phage, CAjan, isolated from rat faeces

(2016) Alexander B. Carstens et al.   ARCHIVES OF VIROLOGY

The Baseplate ofLactobacillus delbrueckiiBacteriophage Ld17 Harbors a Glycerophosphodiesterase

(2016) Anneleen Cornelissen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A ferritin-like protein with antioxidant activity in Ureaplasma urealyticum

(2015) Guozhi Dai et al.   BMC MICROBIOLOGY

An Atypical AAA+ ATPase Assembly Controls Efficient Transposition through DNA Remodeling and Transposase Recruitment

(2015) Ernesto Arias-Palomo et al.   CELL

Molecular Characterization of Three Lactobacillus delbrueckii subsp. bulgaricus Phages

(2014) Eoghan Casey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sequence and comparative analysis of Leuconostoc dairy bacteriophages

(2014) Witold Kot et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Current taxonomy of phages infecting lactic acid bacteria

(2014) Jennifer Mahony et al.   Frontiers in Microbiology

Bacterial group I introns: mobile RNA catalysts

(2014) Georg Hausner et al.   Mobile DNA

DPS – A rapid method for genome sequencing of DNA-containing bacteriophages directly from a single plaque

(2013) Witold Kot et al.   JOURNAL OF VIROLOGICAL METHODS

Revenge of the phages: defeating bacterial defences

(2013) Julie E. Samson et al.   NATURE REVIEWS MICROBIOLOGY

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics

(2013) Tammi Vesth et al.   PLoS One

Aerobic metabolism and oxidative stress tolerance in the Lactobacillus plantarum group

(2013) A. Guidone et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Domain enhanced lookup time accelerated BLAST

(2012) Grzegorz M Boratyn et al.   Biology Direct

Genomic characterization of two Staphylococcus epidermidis bacteriophages with anti-biofilm potential

(2012) Diana Gutiérrez et al.   BMC GENOMICS

Bacteriophage virion-associated peptidoglycan hydrolases: potential new enzybiotics

(2012) Lorena Rodríguez-Rubio et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Phylogenomics of T4 cyanophages: lateral gene transfer in the ‘core’ and origins of host genes

(2012) J. Cesar Ignacio-Espinoza et al.   ENVIRONMENTAL MICROBIOLOGY

Genome sequence of the phage clP1, which infects the beer spoilage bacterium Pediococcus damnosus

(2012) David Kelly et al.   GENE

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Gegenees: Fragmented Alignment of Multiple Genomes for Determining Phylogenomic Distances and Genetic Signatures Unique for Specified Target Groups

(2012) Joakim Ågren et al.   PLoS One

Bacteriophages in Food Fermentations: New Frontiers in a Continuous Arms Race

(2012) Julie E. Samson et al.   Annual Review of Food Science and Technology

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

Evolutionarily Conserved Orthologous Families in Phages Are Relatively Rare in Their Prokaryotic Hosts

(2011) D. M. Kristensen et al.   JOURNAL OF BACTERIOLOGY

Isolation of a Virulent Lactobacillus brevis Phage and Its Application in the Control of Beer Spoilage

(2011) THERESE DEASY et al.   JOURNAL OF FOOD PROTECTION

Use of newly isolated phages for control of Pseudomonas aeruginosa PAO1 and ATCC 10145 biofilms

(2011) Diana Pires et al.   RESEARCH IN MICROBIOLOGY

Inteins, valuable genetic elements in molecular biology and biotechnology

(2010) Skander Elleuche et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Lactobacillus: the Next Generation of Malolactic Fermentation Starter Cultures—an Overview

(2010) Maret du Toit et al.   Food and Bioprocess Technology

Isolation and Characterization of Bacteriophages That Inhibit Strains of Pediococcus Damnosus, Lactobacillus Brevis, and Lactobacillus paraplantarum That Cause Beer Spoilage

(2010) David Kelly et al.   JOURNAL OF THE AMERICAN SOCIETY OF BREWING CHEMISTS

Characterization of the relationship between integrase, excisionase and antirepressor activities associated with a superinfecting Shiga toxin encoding bacteriophage

(2010) P. C. M. Fogg et al.   NUCLEIC ACIDS RESEARCH

Genomes of the T4-related bacteriophages as windows on microbial genome evolution

(2010) Vasiliy M Petrov et al.   Virology Journal

Cryptic prophages help bacteria cope with adverse environments

(2010) Xiaoxue Wang et al.   Nature Communications

Comparative genomics of marine cyanomyoviruses reveals the widespread occurrence ofSynechococcushost genes localized to a hyperplastic region: implications for mechanisms of cyanophage evolution

(2009) Andrew D. Millard et al.   ENVIRONMENTAL MICROBIOLOGY

Bacteriophages of Lactobacillus

(2009) Manuela Villion   Frontiers in Bioscience-Landmark

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH