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Title
Prediction of interresidue contacts with DeepMetaPSICOV in CASP13
Authors
Keywords
-
Journal
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2019-07-12
DOI
10.1002/prot.25779
References
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Related references
Note: Only part of the references are listed.- High precision in protein contact prediction using fully convolutional neural networks and minimal sequence features
- (2018) David T Jones et al. BIOINFORMATICS
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- (2017) Daniel W A Buchan et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Analysis of deep learning methods for blind protein contact prediction in CASP12
- (2017) Sheng Wang et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Protein structure determination using metagenome sequence data
- (2017) Sergey Ovchinnikov et al. SCIENCE
- Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model
- (2017) Sheng Wang et al. PLoS Computational Biology
- Mastering the game of Go with deep neural networks and tree search
- (2016) David Silver et al. NATURE
- All-atom 3D structure prediction of transmembrane β-barrel proteins from sequences
- (2015) Sikander Hayat et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Accurate contact predictions using covariation techniques and machine learning
- (2015) Tomasz Kosciolek et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- CCMpred—fast and precise prediction of protein residue–residue contacts from correlated mutations
- (2014) Stefan Seemayer et al. BIOINFORMATICS
- MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
- (2014) David T. Jones et al. BIOINFORMATICS
- FreeContact: fast and free software for protein contact prediction from residue co-evolution
- (2014) László Kaján et al. BMC BIOINFORMATICS
- kClust: fast and sensitive clustering of large protein sequence databases
- (2013) Maria Hauser et al. BMC BIOINFORMATICS
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Accurate de novo structure prediction of large transmembrane protein domains using fragment-assembly and correlated mutation analysis
- (2012) T. Nugent et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments
- (2011) David T. Jones et al. BIOINFORMATICS
- HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
- (2011) Michael Remmert et al. NATURE METHODS
- Hidden Markov model speed heuristic and iterative HMM search procedure
- (2010) L Steven Johnson et al. BMC BIOINFORMATICS
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