MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 31, Issue 7, Pages 999-1006
Publisher
Oxford University Press (OUP)
Online
2014-11-28
DOI
10.1093/bioinformatics/btu791
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- PconsFold: improved contact predictions improve protein models
- (2014) Mirco Michel et al. BIOINFORMATICS
- CCMpred—fast and precise prediction of protein residue–residue contacts from correlated mutations
- (2014) Stefan Seemayer et al. BIOINFORMATICS
- FreeContact: fast and free software for protein contact prediction from residue co-evolution
- (2014) László Kaján et al. BMC BIOINFORMATICS
- Automated Procedure for Contact-Map-Based Protein Structure Reconstruction
- (2014) Bogumil M. Konopka et al. JOURNAL OF MEMBRANE BIOLOGY
- De Novo Structure Prediction of Globular Proteins Aided by Sequence Variation-Derived Contacts
- (2014) Tomasz Kosciolek et al. PLoS One
- Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
- (2014) Sergey Ovchinnikov et al. eLife
- PconsC: combination of direct information methods and alignments improves contact prediction
- (2013) Marcin J. Skwark et al. BIOINFORMATICS
- Prediction of contacts from correlated sequence substitutions
- (2013) William R Taylor et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Emerging methods in protein co-evolution
- (2013) David de Juan et al. NATURE REVIEWS GENETICS
- Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing
- (2012) Thomas A. Hopf et al. CELL
- Accurate de novo structure prediction of large transmembrane protein domains using fragment-assembly and correlated mutation analysis
- (2012) T. Nugent et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Protein-Folding Problem, 50 Years On
- (2012) K. A. Dill et al. SCIENCE
- PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments
- (2011) David T. Jones et al. BIOINFORMATICS
- HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
- (2011) Michael Remmert et al. NATURE METHODS
- Protein 3D Structure Computed from Evolutionary Sequence Variation
- (2011) Debora S. Marks et al. PLoS One
- Pair potentials for protein folding: Choice of reference states and sensitivity of predicted native states to variations in the interaction schemes
- (2010) Marcos R. Betancourt et al. PROTEIN SCIENCE
- Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8
- (2009) Iakes Ezkurdia et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Identification of direct residue contacts in protein-protein interaction by message passing
- (2008) M. Weigt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started