Distributed phenomics with the un PAK project reveals the effects of mutations

From genome to phenome: genome-wide association studies and other approaches that bridge the genotype to phenotype gap

(2019) Alisdair R. Fernie et al.   PLANT JOURNAL

Quantifying natural seasonal variation in mutation parameters with mutation accumulation lines

(2018) Matthew T. Rutter et al.   Ecology and Evolution

Evolutionary and ecological functional genomics, from lab to the wild

(2018) Maricris L. Zaidem et al.   PLANT JOURNAL

Fitness effects of mutation: testing genetic redundancy in Arabidopsis thaliana

(2017) M. T. Rutter et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

CUREs in biochemistry-where we are and where we should go

(2016) Jessica K. Bell et al.   BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

(2016) Carlos Alonso-Blanco et al.   CELL

Evolution by gene loss

(2016) Ricard Albalat et al.   NATURE REVIEWS GENETICS

The pangenome of an agronomically important crop plant Brassica oleracea

(2016) Agnieszka A. Golicz et al.   Nature Communications

A De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny

(2016) Boas Pucker et al.   PLoS One

The Phenotypic Effects of Spontaneous Mutations in Different Environments

(2015) Leigh C. Latta et al.   AMERICAN NATURALIST

Local Adaptation by Alleles of Small Effect

(2015) Sam Yeaman   AMERICAN NATURALIST

Modeling Course-Based Undergraduate Research Experiences: An Agenda for Future Research and Evaluation

(2015) Lisa A. Corwin et al.   CBE-Life Sciences Education

A Relay Race on the Evolutionary Adaptation Spectrum

(2015) Avihu H. Yona et al.   CELL

Root architecture, plant size and soil nutrient variation in natural populations of Arabidopsis thaliana

(2015) Laura Ferguson et al.   EVOLUTIONARY ECOLOGY

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Identification of a large set of rare complete human knockouts

(2015) Patrick Sulem et al.   NATURE GENETICS

The origins of mutational robustness

(2015) Mario A. Fares   TRENDS IN GENETICS

Finding Our Way through Phenotypes

(2015) Andrew R. Deans et al.   PLOS BIOLOGY

Assessment of Course-Based Undergraduate Research Experiences: A Meeting Report

(2014) Lisa Corwin Auchincloss et al.   CBE-Life Sciences Education

Interaction between parental environment and genotype affects plant and seed performance in Arabidopsis

(2014) Hanzi He et al.   JOURNAL OF EXPERIMENTAL BOTANY

The gibberellin biosynthetic genesAtKAO1andAtKAO2have overlapping roles throughoutArabidopsisdevelopment

(2014) Thomas Regnault et al.   PLANT JOURNAL

Leaf phenomics: a systematic reverse genetic screen for Arabidopsis leaf mutants

(2014) David Wilson-Sánchez et al.   PLANT JOURNAL

Lagging adaptation to warming climate in Arabidopsis thaliana

(2014) A. M. Wilczek et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Future Scenarios for Plant Phenotyping

(2013) Fabio Fiorani et al.   Annual Review of Plant Biology

Plant phenomics and high-throughput phenotyping: accelerating rice functional genomics using multidisciplinary technologies

(2013) Wanneng Yang et al.   CURRENT OPINION IN PLANT BIOLOGY

Molecular mechanisms of paralogous compensation and the robustness of cellular networks

(2013) Guillaume Diss et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION

The need for agriculture phenotyping: “Moving from genotype to phenotype”

(2013) Mark V. Boggess et al.   Journal of Proteomics

Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana

(2013) Benjamin Brachi et al.   MOLECULAR ECOLOGY

Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden

(2013) Quan Long et al.   NATURE GENETICS

Genotype to phenotype: lessons from model organisms for human genetics

(2013) Ben Lehner   NATURE REVIEWS GENETICS

GABI-DUPLO: a collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana

(2013) Cordelia Bolle et al.   PLANT JOURNAL

Evidence for parallel adaptation to climate across the natural range ofArabidopsis thaliana

(2013) Frank W. Stearns et al.   Ecology and Evolution

The Majority of Animal Genes Are Required for Wild-Type Fitness

(2012) Arun K. Ramani et al.   CELL

Climate envelope modelling reveals intraspecific relationships among flowering phenology, niche breadth and potential range size inArabidopsis thaliana

(2012) Joshua A. Banta et al.   ECOLOGY LETTERS

FITNESS OF ARABIDOPSIS THALIANA MUTATION ACCUMULATION LINES WHOSE SPONTANEOUS MUTATIONS ARE KNOWN

(2012) Matthew T. Rutter et al.   EVOLUTION

Phenotyping plants: genes, phenes and machines

(2012) Roland Pieruschka et al.   FUNCTIONAL PLANT BIOLOGY

Deep phenotyping for precision medicine

(2012) Peter N. Robinson   HUMAN MUTATION

Natural Variation in Abiotic Stress and Climate Change Responses in Arabidopsis: Implications for Twenty-First-Century Agriculture

(2012) Sarah M. Assmann   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Disentangling the Intertwined Genetic Bases of Root and Shoot Growth in Arabidopsis

(2012) Marie Bouteillé et al.   PLoS One

Extensive Phenotypic Variation among Allelic T-DNA Inserts in Arabidopsis thaliana

(2012) Megan E. Valentine et al.   PLoS One

Genetics and evolution of function-valued traits: understanding environmentally responsive phenotypes

(2012) John R. Stinchcombe et al.   TRENDS IN ECOLOGY & EVOLUTION

Birth, death and subfunctionalization in the Arabidopsis genome

(2012) Matthew T. Rutter et al.   TRENDS IN PLANT SCIENCE

Longitudinal trends in climate drive flowering time clines in North AmericanArabidopsis thaliana

(2012) Karen E. Samis et al.   Ecology and Evolution

A Regulatory Network for Coordinated Flower Maturation

(2012) Paul H. Reeves et al.   PLoS Genetics

Genome-Wide Patterns of Arabidopsis Gene Expression in Nature

(2012) Christina L. Richards et al.   PLoS Genetics

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

(2011) Xiangchao Gan et al.   NATURE

Whole-genome sequencing of multiple Arabidopsis thaliana populations

(2011) Jun Cao et al.   NATURE GENETICS

Systems-biology approaches for predicting genomic evolution

(2011) Balázs Papp et al.   NATURE REVIEWS GENETICS

Adaptation to Climate Across the Arabidopsis thaliana Genome

(2011) A. M. Hancock et al.   SCIENCE

Phenomics – technologies to relieve the phenotyping bottleneck

(2011) Robert T. Furbank et al.   TRENDS IN PLANT SCIENCE

Phenomics: the next challenge

(2010) David Houle et al.   NATURE REVIEWS GENETICS

Arabidopsis thaliana populations show clinal variation in a climatic gradient associated with altitude

(2010) Alicia Montesinos-Navarro et al.   NEW PHYTOLOGIST

Linking genotype to phenotype using the Arabidopsis unimutant collection

(2010) Ronan C. O’Malley et al.   PLANT JOURNAL

Variation of Herbivore-Induced Volatile Terpenes among Arabidopsis Ecotypes Depends on Allelic Differences and Subcellular Targeting of Two Terpene Synthases, TPS02 and TPS03

(2010) M. Huang et al.   PLANT PHYSIOLOGY

Probing the Reproducibility of Leaf Growth and Molecular Phenotypes: A Comparison of Three Arabidopsis Accessions Cultivated in Ten Laboratories

(2010) C. Massonnet et al.   PLANT PHYSIOLOGY

Experimental genomics of fitness in yeast

(2010) G. Bell   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

Plant phenotypic plasticity in a changing climate

(2010) A.B. Nicotra et al.   TRENDS IN PLANT SCIENCE

SPONTANEOUS MUTATION PARAMETERS FOR ARABIDOPSIS THALIANA MEASURED IN THE WILD

(2009) Matthew T. Rutter et al.   EVOLUTION

Evolutionary Persistence of Functional Compensation by Duplicate Genes in Arabidopsis

(2009) Kousuke Hanada et al.   Genome Biology and Evolution

The 1001 Genomes Project for Arabidopsis thaliana

(2009) Detlef Weigel et al.   GENOME BIOLOGY

The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes

(2008) M. E. Hillenmeyer et al.   SCIENCE