Characterization of three plant biomass-degrading microbial consortia by metagenomics- and metasecretomics-based approaches

Different inocula produce distinctive microbial consortia with similar lignocellulose degradation capacity

(2016) Larisa Cortes-Tolalpa et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Succession of lignocellulolytic bacterial consortia bred anaerobically from lake sediment

(2016) Elisa Korenblum et al.   Microbial Biotechnology

Cellulose Degradation by Polysaccharide Monooxygenases

(2015) William T. Beeson et al.   Annual Review of Biochemistry

Metagenome approaches revealed a biological prospect for improvement on mesophilic cellulose degradation

(2015) Yubo Wang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Efficient anaerobic transformation of raw wheat straw by a robust cow rumen-derived microbial consortium

(2015) Adèle Lazuka et al.   BIORESOURCE TECHNOLOGY

Metasecretome analysis of a lignocellulolytic microbial consortium grown on wheat straw, xylan and xylose

(2015) Diego Javier Jiménez et al.   Biotechnology for Biofuels

A new generation of versatile chromogenic substrates for high-throughput analysis of biomass-degrading enzymes

(2015) Stjepan Krešimir Kračun et al.   Biotechnology for Biofuels

Celluclast and Cellic® CTec2: Saccharification/fermentation of wheat straw, solid–liquid partition and potential of enzyme recycling by alkaline washing

(2015) Ana Cristina Rodrigues et al.   ENZYME AND MICROBIAL TECHNOLOGY

Forest harvesting reduces the soil metagenomic potential for biomass decomposition

(2015) Erick Cardenas et al.   ISME Journal

Soil-Derived Microbial Consortia Enriched with Different Plant Biomass Reveal Distinct Players Acting in Lignocellulose Degradation

(2015) Maria Julia de Lima Brossi et al.   MICROBIAL ECOLOGY

Unveiling the metabolic potential of two soil-derived microbial consortia selected on wheat straw

(2015) Diego Javier Jiménez et al.   Scientific Reports

Complete genome sequence of the lignin-degrading bacterium Klebsiella sp. strain BRL6-2

(2015) Hannah L Woo et al.   Standards in Genomic Sciences

Substrate-Specific Development of Thermophilic Bacterial Consortia by Using Chemically Pretreated Switchgrass

(2014) Stephanie A. Eichorst et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomic Potential for Polysaccharide Deconstruction in Bacteria

(2014) Renaud Berlemont et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metataxonomic profiling and prediction of functional behaviour of wheat straw degrading microbial consortia

(2014) Diego Jiménez et al.   Biotechnology for Biofuels

Metatranscriptomic analysis of lignocellulolytic microbial communities involved in high-solids decomposition of rice straw

(2014) Christopher W Simmons et al.   Biotechnology for Biofuels

Comparative metagenomic analysis of microcosm structures and lignocellulolytic enzyme systems of symbiotic biomass-degrading consortia

(2013) Sarunyou Wongwilaiwalin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Novel multispecies microbial consortia involved in lignocellulose and 5-hydroxymethylfurfural bioconversion

(2013) Diego Javier Jiménez et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Recalcitrant polysaccharide degradation by novel oxidative biocatalysts

(2013) Maria Dimarogona et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Cellulose degradation by one mesophilic strain Caulobacter sp. FMC1 under both aerobic and anaerobic conditions

(2013) Na Song et al.   BIORESOURCE TECHNOLOGY

A novel lignin degradation bacterial consortium for efficient pulping

(2013) Yanxia Wang et al.   BIORESOURCE TECHNOLOGY

Do new cellulolytic enzyme preparations affect the industrial strategies for high solids lignocellulosic ethanol production?

(2013) David Cannella et al.   BIOTECHNOLOGY AND BIOENGINEERING

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

(2013) Anthony Levasseur et al.   Biotechnology for Biofuels

Strong cellulase inhibitors from the hydrothermal pretreatment of wheat straw

(2013) Riin Kont et al.   Biotechnology for Biofuels

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Proteogenomic Analysis of a Thermophilic Bacterial Consortium Adapted to Deconstruct Switchgrass

(2013) Patrik D'haeseleer et al.   PLoS One

Identification of Cellulose-Responsive Bacterial and Fungal Communities in Geographically and Edaphically Different Soils by Using Stable Isotope Probing

(2012) Stephanie A. Eichorst et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Influence of ligninolytic enzymes on straw saccharification during fungal pretreatment

(2012) Paula A. Pinto et al.   BIORESOURCE TECHNOLOGY

A review of enzymes and microbes for lignocellulosic biorefinery and the possibility of their application to consolidated bioprocessing technology

(2012) Tomohisa Hasunuma et al.   BIORESOURCE TECHNOLOGY

Fungal pretreatment of lignocellulosic biomass

(2012) Caixia Wan et al.   BIOTECHNOLOGY ADVANCES

Novel enzymes for the degradation of cellulose

(2012) Svein Horn et al.   Biotechnology for Biofuels

Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective

(2012) H. Teeling et al.   BRIEFINGS IN BIOINFORMATICS

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

A Thermophilic Ionic Liquid-Tolerant Cellulase Cocktail for the Production of Cellulosic Biofuels

(2012) Joshua I. Park et al.   PLoS One

Lignocellulosic biomass for bioethanol production: Current perspectives, potential issues and future prospects

(2012) Alya Limayem et al.   PROGRESS IN ENERGY AND COMBUSTION SCIENCE

Glycoside Hydrolase Activities of Thermophilic Bacterial Consortia Adapted to Switchgrass

(2011) John M. Gladden et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Substrate perturbation alters the glycoside hydrolase activities and community composition of switchgrass-adapted bacterial consortia

(2011) John M. Gladden et al.   BIOTECHNOLOGY AND BIOENGINEERING

Hemicellulases and auxiliary enzymes for improved conversion of lignocellulosic biomass to monosaccharides

(2011) Dahai Gao et al.   Biotechnology for Biofuels

Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil

(2011) Kristen M. DeAngelis et al.   PLoS One

Biodiversity characterization of cellulolytic bacteria present on native Chaco soil by comparison of ribosomal RNA genes

(2011) Paola Talia et al.   RESEARCH IN MICROBIOLOGY

Complete genome sequence of “Enterobacter lignolyticus” SCF1

(2011) Kristen M. DeAngelis et al.   Standards in Genomic Sciences

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Cloning, expression in Escherichia coli, and enzymatic properties of laccase from Aeromonas hydrophila WL-11

(2010) Jing Wu et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

An overview of second generation biofuel technologies

(2009) Ralph E.H. Sims et al.   BIORESOURCE TECHNOLOGY

The minimal enzyme cocktail concept for biomass processing

(2009) Anne S. Meyer et al.   JOURNAL OF CEREAL SCIENCE

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS