The role of the genome in experience-dependent plasticity: Extending the analogy of the genomic action potential

Memory Allocation: Mechanisms and Function

(2018) Sheena A. Josselyn et al.   Annual Review of Neuroscience

Understanding the Molecular Mechanisms Underpinning Gene by Environment Interactions in Psychiatric Disorders: The FKBP5 Model

(2018) Natalie Matosin et al.   BIOLOGICAL PSYCHIATRY

The Neuronal Gene Arc Encodes a Repurposed Retrotransposon Gag Protein that Mediates Intercellular RNA Transfer

(2018) Elissa D. Pastuzyn et al.   CELL

Retrovirus-like Gag Protein Arc1 Binds RNA and Traffics across Synaptic Boutons

(2018) James Ashley et al.   CELL

Behavioral, cellular, and synaptic tagging frameworks

(2018) Masanori Nomoto et al.   NEUROBIOLOGY OF LEARNING AND MEMORY

Different Neuronal Activity Patterns Induce Different Gene Expression Programs

(2018) Kelsey M. Tyssowski et al.   NEURON

Advancing behavioural genomics by considering timescale

(2018) Clare C. Rittschof et al.   Nature Communications

Genetic signatures of memories

(2018) Vivek Sagar et al.   eLife

A novel source of arterial valve cells linked to bicuspid aortic valve without raphe in mice

(2018) Lorriane Eley et al.   eLife

Single-Cell RNA-Seq Uncovers a Robust Transcriptional Response to Morphine by Glia

(2018) Denis Avey et al.   Cell Reports

Silent Learning

(2018) Janine I. Rossato et al.   CURRENT BIOLOGY

Activity-Regulated Transcription: Bridging the Gap between Neural Activity and Behavior

(2018) Ee-Lynn Yap et al.   NEURON

Social status alters chromatin accessibility and the gene regulatory response to glucocorticoid stimulation in rhesus macaques

(2018) Noah Snyder-Mackler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stable Polycomb-dependent transgenerational inheritance of chromatin states in Drosophila

(2017) Filippo Ciabrelli et al.   NATURE GENETICS

Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex

(2017) Sinisa Hrvatin et al.   NATURE NEUROSCIENCE

Detecting Activated Cell Populations Using Single-Cell RNA-Seq

(2017) Ye Emily Wu et al.   NEURON

Overlapping memory trace indispensable for linking, but not recalling, individual memories

(2017) Jun Yokose et al.   SCIENCE

Gene networks activated by specific patterns of action potentials in dorsal root ganglia neurons

(2017) Philip R. Lee et al.   Scientific Reports

FK506 binding protein 51 integrates pathways of adaptation

(2016) Theo Rein   BIOESSAYS

Effects of the Social Environment and Stress on Glucocorticoid Receptor Gene Methylation: A Systematic Review

(2016) Gustavo Turecki et al.   BIOLOGICAL PSYCHIATRY

Neuronal Firing Rate Homeostasis Is Inhibited by Sleep and Promoted by Wake

(2016) Keith B. Hengen et al.   CELL

Sensory experience regulates cortical inhibition by inducing IGF1 in VIP neurons

(2016) A. R. Mardinly et al.   NATURE

A shared neural ensemble links distinct contextual memories encoded close in time

(2016) Denise J. Cai et al.   NATURE

Activation of the reward system boosts innate and adaptive immunity

(2016) Tamar L Ben-Shaanan et al.   NATURE MEDICINE

Parvalbumin interneurons constrain the size of the lateral amygdala engram

(2016) Dano J. Morrison et al.   NEUROBIOLOGY OF LEARNING AND MEMORY

Hippocampal Somatostatin Interneurons Control the Size of Neuronal Memory Ensembles

(2016) Thomas Stefanelli et al.   NEURON

Competition between engrams influences fear memory formation and recall

(2016) A. J. Rashid et al.   SCIENCE

Neuronal activity controls Bdnf expression via Polycomb de-repression and CREB/CBP/JMJD3 activation in mature neurons

(2016) Ernest Palomer et al.   Nature Communications

Nuclear RNA-seq of single neurons reveals molecular signatures of activation

(2016) Benjamin Lacar et al.   Nature Communications

Amygdalar MicroRNA-15a Is Essential for Coping with Chronic Stress

(2016) Naama Volk et al.   Cell Reports

Set1/COMPASS and Mediator are repurposed to promote epigenetic transcriptional memory

(2016) Agustina D'Urso et al.   eLife

Role of Immediate-Early Genes in Synaptic Plasticity and Neuronal Ensembles Underlying the Memory Trace

(2016) Keiichiro Minatohara et al.   Frontiers in Molecular Neuroscience

Diagnostic Biomarkers for Posttraumatic Stress Disorder: Promising Horizons from Translational Neuroscience Research

(2015) Vasiliki Michopoulos et al.   BIOLOGICAL PSYCHIATRY

Activity-Induced DNA Breaks Govern the Expression of Neuronal Early-Response Genes

(2015) Ram Madabhushi et al.   CELL

Finding the engram

(2015) Sheena A. Josselyn et al.   NATURE REVIEWS NEUROSCIENCE

Memory Engram Cells Have Come of Age

(2015) Susumu Tonegawa et al.   NEURON

Gene–Stress–Epigenetic Regulation of FKBP5: Clinical and Translational Implications

(2015) Anthony S Zannas et al.   NEUROPSYCHOPHARMACOLOGY

Chaperoning epigenetics: FKBP51 decreases the activity of DNMT1 and mediates epigenetic effects of the antidepressant paroxetine

(2015) Nils C. Gassen et al.   Science Signaling

Chaperoning epigenetics: FKBP51 decreases the activity of DNMT1 and mediates epigenetic effects of the antidepressant paroxetine

(2015) Nils C. Gassen et al.   Science Signaling

Chromatin states reveal functional associations for globally defined transcription start sites in four human cell lines

(2014) Morten Rye et al.   BMC GENOMICS

Npas4 Regulates Excitatory-Inhibitory Balance within Neural Circuits through Cell-Type-Specific Gene Programs

(2014) Ivo Spiegel et al.   CELL

Histone H2A.Z subunit exchange controls consolidation of recent and remote memory

(2014) Iva B. Zovkic et al.   NATURE

Non-invasive intravital imaging of cellular differentiation with a bright red-excitable fluorescent protein

(2014) Jun Chu et al.   NATURE METHODS

Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice

(2014) Katharina Gapp et al.   NATURE NEUROSCIENCE

Visualizing an emotional valence map in the limbic forebrain by TAI-FISH

(2014) Jianbo Xiu et al.   NATURE NEUROSCIENCE

Neurons Are Recruited to a Memory Trace Based on Relative Neuronal Excitability Immediately before Training

(2014) Adelaide P. Yiu et al.   NEURON

Early-Life Experience, Epigenetics and the Developing Brain

(2014) Marija Kundakovic et al.   NEUROPSYCHOPHARMACOLOGY

Expression profiling associates blood and brain glucocorticoid receptor signaling with trauma-related individual differences in both sexes

(2014) Nikolaos P. Daskalakis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of epigenetic memory

(2014) Agustina D’Urso et al.   TRENDS IN GENETICS

The Genomics of Memory and Learning in Songbirds

(2013) David F. Clayton   Annual Review of Genomics and Human Genetics

Social descent with territory loss causes rapid behavioral, endocrine and transcriptional changes in the brain

(2013) K. P. Maruska et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

The activity-dependent transcription factor NPAS4 regulates domain-specific inhibition

(2013) Brenda L. Bloodgood et al.   NATURE

Parental olfactory experience influences behavior and neural structure in subsequent generations

(2013) Brian G Dias et al.   NATURE NEUROSCIENCE

Histone acetylation: molecular mnemonics on the chromatin

(2013) Johannes Gräff et al.   NATURE REVIEWS NEUROSCIENCE

TET1 Controls CNS 5-Methylcytosine Hydroxylation, Active DNA Demethylation, Gene Transcription, and Memory Formation

(2013) Garrett A. Kaas et al.   NEURON

About Sleep's Role in Memory

(2013) Björn Rasch et al.   PHYSIOLOGICAL REVIEWS

Detection of Histone Acetylation Levels in the Dorsal Hippocampus Reveals Early Tagging on Specific Residues of H2B and H4 Histones in Response to Learning

(2013) Olivier Bousiges et al.   PLoS One

Role of activity-dependent BDNF expression in hippocampal-prefrontal cortical regulation of behavioral perseverance

(2013) K. Sakata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activity-Dependent Human Brain Coding/Noncoding Gene Regulatory Networks

(2012) L. Lipovich et al.   GENETICS

Epigenetic inheritance of a cocaine-resistance phenotype

(2012) Fair M Vassoler et al.   NATURE NEUROSCIENCE

Allele-specific FKBP5 DNA demethylation mediates gene–childhood trauma interactions

(2012) Torsten Klengel et al.   NATURE NEUROSCIENCE

Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain

(2011) Preethi H Gunaratne et al.   BMC GENOMICS

New views of Arc, a master regulator of synaptic plasticity

(2011) Jason D Shepherd et al.   NATURE NEUROSCIENCE

Neuronal Activity Regulates Hippocampal miRNA Expression

(2011) Stephen M. Eacker et al.   PLoS One

Npas4 Regulates a Transcriptional Program in CA3 Required for Contextual Memory Formation

(2011) K. Ramamoorthi et al.   SCIENCE

The neuroendocrine action potential

(2010) Hans A. Hofmann   HORMONES AND BEHAVIOR

Epigenetic regulation of the neural transcriptome: the meaning of the marks

(2010) Michael J Meaney et al.   NATURE NEUROSCIENCE

Depolarization induces acetylation of histone H2B in the hippocampus

(2010) C. Maharana et al.   NEUROSCIENCE

Relevance of synaptic tagging and capture to the persistence of long-term potentiation and everyday spatial memory

(2010) S.-H. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Robustness of transcriptional regulatory program influences gene expression variability

(2009) Zhiming Dai et al.   BMC GENOMICS

Developmental shifts in gene expression in the auditory forebrain during the sensitive period for song learning

(2009) Sarah E. London et al.   Developmental Neurobiology

Rapid Activation of Plasticity-Associated Gene Transcription in Hippocampal Neurons Provides a Mechanism for Encoding of One-Trial Experience

(2009) T. Miyashita et al.   JOURNAL OF NEUROSCIENCE

HDAC2 negatively regulates memory formation and synaptic plasticity

(2009) Ji-Song Guan et al.   NATURE

Behavioral tagging is a general mechanism of long-term memory formation

(2009) F. Ballarini et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discrete molecular states in the brain accompany changing responses to a vocal signal

(2009) S. Dong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selective Erasure of a Fear Memory

(2009) J.-H. Han et al.   SCIENCE

Database for mRNA Half-Life of 19 977 Genes Obtained by DNA Microarray Analysis of Pluripotent and Differentiating Mouse Embryonic Stem Cells

(2008) L. V. Sharova et al.   DNA RESEARCH

Epigenetic Regulation of bdnf Gene Transcription in the Consolidation of Fear Memory

(2008) F. D. Lubin et al.   JOURNAL OF NEUROSCIENCE

Immediate-Early Gene Expression at Rest Recapitulates Recent Experience

(2008) D. F. Marrone et al.   JOURNAL OF NEUROSCIENCE

S-nitrosylation of histone deacetylase 2 induces chromatin remodelling in neurons

(2008) Alexi Nott et al.   NATURE

From Synapse to Nucleus: Calcium-Dependent Gene Transcription in the Control of Synapse Development and Function

(2008) Paul L. Greer et al.   NEURON