PEPred-Suite: improved and robust prediction of therapeutic peptides using adaptive feature representation learning

Prediction of bacteriophage proteins located in the host cell using hybrid features

(2018) Jing-Hui Cheng et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Complex Network Study of the Immune Epitope Database for Parasitic Organisms

(2018) Severo Vazquez- Prieto et al.   CURRENT TOPICS IN MEDICINAL CHEMISTRY

HBPred: a tool to identify growth hormone-binding proteins

(2018) Hua Tang et al.   International Journal of Biological Sciences

iRSpot-Pse6NC: Identifying recombination spots in Saccharomyces cerevisiae by incorporating hexamer composition into general PseKNC

(2018) Hui Yang et al.   International Journal of Biological Sciences

AIPpred: Sequence-Based Prediction of Anti-inflammatory Peptides Using Random Forest

(2018) Balachandran Manavalan et al.   Frontiers in Pharmacology

CPPred-FL: a sequence-based predictor for large-scale identification of cell-penetrating peptides by feature representation learning

(2018) Xiaoli Qiang et al.   BRIEFINGS IN BIOINFORMATICS

PhosPred-RF: A Novel Sequence-Based Predictor for Phosphorylation Sites Using Sequential Information Only

(2017) Leyi Wei et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

Local-DPP: An improved DNA-binding protein prediction method by exploring local evolutionary information

(2017) Leyi Wei et al.   INFORMATION SCIENCES

CPPred-RF: A Sequence-based Predictor for Identifying Cell-Penetrating Peptides and Their Uptake Efficiency

(2017) Leyi Wei et al.   JOURNAL OF PROTEOME RESEARCH

Prediction of anti-inflammatory proteins/peptides: an insilico approach

(2017) Sudheer Gupta et al.   Journal of Translational Medicine

A study of the Immune Epitope Database for some fungi species using network topological indices

(2017) Severo Vázquez-Prieto et al.   MOLECULAR DIVERSITY

QSPR-Perturbation Models for the Prediction of B-Epitopes from Immune Epitope Database: A Potentially Valuable Route for Predicting “In Silico” New Optimal Peptide Sequences and/or Boundary Conditions for Vaccine Development

(2016) Severo Vázquez-Prieto et al.   International Journal of Peptide Research and Therapeutics

Peptide therapeutics: current status and future directions

(2015) Keld Fosgerau et al.   DRUG DISCOVERY TODAY

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

(2015) Bin Liu et al.   NUCLEIC ACIDS RESEARCH

Prediction and Analysis of Quorum Sensing Peptides Based on Sequence Features

(2015) Akanksha Rajput et al.   PLoS One

AntiAngioPred: A Server for Prediction of Anti-Angiogenic Peptides

(2015) Azhagiya Singam Ettayapuram Ramaprasad et al.   PLoS One

Incorporating key position and amino acid residue features to identify general and species-specific Ubiquitin conjugation sites

(2013) Xiang Chen et al.   BIOINFORMATICS

AVPpred: collection and prediction of highly effective antiviral peptides

(2012) Nishant Thakur et al.   NUCLEIC ACIDS RESEARCH

pROC: an open-source package for R and S+ to analyze and compare ROC curves

(2011) Xavier Robin et al.   BMC BIOINFORMATICS

PseAAC: A flexible web server for generating various kinds of protein pseudo amino acid composition

(2007) Hong-Bin Shen et al.   ANALYTICAL BIOCHEMISTRY