A study of the Immune Epitope Database for some fungi species using network topological indices

QSPR-Perturbation Models for the Prediction of B-Epitopes from Immune Epitope Database: A Potentially Valuable Route for Predicting “In Silico” New Optimal Peptide Sequences and/or Boundary Conditions for Vaccine Development

(2016) Severo Vázquez-Prieto et al.   International Journal of Peptide Research and Therapeutics

Analysis and identification of essential genes in humans using topological properties and biological information

(2014) Lei Yang et al.   GENE

Model for Vaccine Design by Prediction of B-Epitopes of IEDB Given Perturbations in Peptide Sequence, In Vivo Process, Experimental Techniques, and Source or Host Organisms

(2014) Humberto González-Díaz et al.   Journal of Immunology Research

A QSPR-like model for multilocus genotype networks of Fasciola hepatica in Northwest Spain

(2013) Severo Vázquez-Prieto et al.   JOURNAL OF THEORETICAL BIOLOGY

Yin and Yang of disease genes and death genes between reciprocally scale-free biological networks

(2013) Hyun Wook Han et al.   NUCLEIC ACIDS RESEARCH

Strategies to Query and Display Allergy-Derived Epitope Data from the Immune Epitope Database

(2012) Kerrie Vaughan et al.   INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY

Network-based characterization of drug-regulated genes, drug targets, and toxicity

(2012) Max Kotlyar et al.   METHODS

Protein network prediction and topological analysis in Leishmania major as a tool for drug target selection

(2010) Andrés F Flórez et al.   BMC BIOINFORMATICS

Reconstruction of the yeast protein-protein interaction network involved in nutrient sensing and global metabolic regulation

(2010) Subir K Nandy et al.   BMC Systems Biology

Predicting Drugs and Proteins in Parasite Infections with Topological Indices of Complex Networks: Theoretical Backgrounds, Applications and Legal Issues

(2010) Humberto Gonzalez-Diaz et al.   CURRENT PHARMACEUTICAL DESIGN

A Global Protein Kinase and Phosphatase Interaction Network in Yeast

(2010) A. Breitkreutz et al.   SCIENCE

Multi-target spectral moment: QSAR for antifungal drugs vs. different fungi species

(2009) Francisco J. Prado-Prado et al.   EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY

Kinetic plasticity and the determination of product ratios for kinetic schemes leading to multiple products without rate laws — New methods based on directed graphs

(2008) John Andraos   CANADIAN JOURNAL OF CHEMISTRY

A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation

(2008) Y.-y. Lin et al.   GENES & DEVELOPMENT

A Protein Interaction Network Analysis for Yeast Integral Membrane Protein

(2008) Ming-Guang Shi et al.   PROTEIN AND PEPTIDE LETTERS

Proteomics, networks and connectivity indices

(2008) Humberto González-Díaz et al.   PROTEOMICS