Bacterial phytochromes: More than meets the light

Fused-Gene Approach to Photoswitchable and Fluorescent Biliproteins

(2010) Juan Zhang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Signaling Mechanisms of HAMP Domains in Chemoreceptors and Sensor Kinases

(2010) John S. Parkinson   Annual Review of Microbiology

Fungi, Hidden in Soil or Up in the Air: Light Makes a Difference

(2010) Julio Rodriguez-Romero et al.   Annual Review of Microbiology

Structure and Function of Plant Photoreceptors

(2010) Andreas Möglich et al.   Annual Review of Plant Biology

Phytochrome three-dimensional structures and functions

(2010) Jon Hughes   BIOCHEMICAL SOCIETY TRANSACTIONS

Regulation of the Ppr Histidine Kinase by Light-Induced Interactions between Its Photoactive Yellow Protein and Bacteriophytochrome Domains

(2010) John A. Kyndt et al.   BIOCHEMISTRY

A Brief History of Phytochromes

(2010) Nathan C. Rockwell et al.   CHEMPHYSCHEM

Light-Induced Conformational Changes of the Chromophore and the Protein in Phytochromes: Bacterial Phytochromes as Model Systems

(2010) Patrick Scheerer et al.   CHEMPHYSCHEM

Light-Induced Activation of Bacterial Phytochrome Agp1 Monitored by Static and Time-Resolved FTIR Spectroscopy

(2010) Patrick Piwowarski et al.   CHEMPHYSCHEM

Bathy Phytochromes in Rhizobial Soil Bacteria

(2010) G. Rottwinkel et al.   JOURNAL OF BACTERIOLOGY

Fluorescence of Phytochrome Adducts with Synthetic Locked Chromophores

(2010) Benjamin Zienicke et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Addition at the Molecular Level: Signal Integration in Designed Per–ARNT–Sim Receptor Proteins

(2010) Andreas Möglich et al.   JOURNAL OF MOLECULAR BIOLOGY

Circadian Input Kinases and Their Homologs in Cyanobacteria: Evolutionary Constraints Versus Architectural Diversification

(2010) Ivan Baca et al.   JOURNAL OF MOLECULAR EVOLUTION

Phytochrome as Molecular Machine: Revealing Chromophore Action during the Pfr → Pr Photoconversion by Magic-Angle Spinning NMR Spectroscopy

(2010) Thierry Rohmer et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structural basis for the photoconversion of a phytochrome to the activated Pfr form

(2010) Andrew T. Ulijasz et al.   NATURE

Quaternary organization of a phytochrome dimer as revealed by cryoelectron microscopy

(2010) H. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proton-transfer and hydrogen-bond interactions determine fluorescence quantum yield and photochemical efficiency of bacteriophytochrome

(2010) K. C. Toh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyanobacteriochrome CcaS regulates phycoerythrin accumulation in Nostoc punctiforme, a group II chromatic adapter

(2010) Y. Hirose et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystallization and preliminary X-ray studies of the chromophore-binding domain of cyanobacteriochrome AnPixJ fromAnabaenasp. PCC 7120

(2009) Rei Narikawa et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Chemotaxis-Like Regulatory Systems: Unique Roles in Diverse Bacteria

(2009) John R. Kirby   Annual Review of Microbiology

Assembly ofAgrobacteriumPhytochromes Agp1 and Agp2 with Doubly Locked Bilin Chromophores†

(2009) Katsuhiko Inomata et al.   BIOCHEMISTRY

Characterization of the Covalent and Noncovalent Adducts of Agp1 Phytochrome Assembled with Biliverdin and Phycocyanobilin by Circular Dichroism and Flash Photolysis

(2009) Berthold Borucki et al.   BIOCHEMISTRY

Chromophore Structure of Cyanobacterial Phytochrome Cph1 in the Pr State: Reconciling Structural and Spectroscopic Data by QM/MM Calculations

(2009) Maria Andrea Mroginski et al.   BIOPHYSICAL JOURNAL

Tightening the Knot in Phytochrome by Single-Molecule Atomic Force Microscopy

(2009) Thomas Bornschlögl et al.   BIOPHYSICAL JOURNAL

A Polarity Probe for Monitoring Light-induced Structural Changes at the Entrance of the Chromophore Pocket in a Bacterial Phytochrome

(2009) Berthold Borucki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cyanochromes Are Blue/Green Light Photoreversible Photoreceptors Defined by a Stable Double Cysteine Linkage to a Phycoviolobilin-type Chromophore

(2009) Andrew T. Ulijasz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Molecular Dynamics Simulations of the Chromophore Binding Site ofDeinococcus radioduransBacteriophytochrome Using New Force Field Parameters for the Phytochromobilin Chromophore

(2009) Steve Kaminski et al.   JOURNAL OF PHYSICAL CHEMISTRY B

FdTonB is involved in the photoregulation of cellular morphology during complementary chromatic adaptation in Fremyella diplosiphon

(2009) B. Pattanaik et al.   MICROBIOLOGY-SGM

Spatiotemporal control of cell signalling using a light-switchable protein interaction

(2009) Anselm Levskaya et al.   NATURE

A genetically encoded photoactivatable Rac controls the motility of living cells

(2009) Yi I. Wu et al.   NATURE

Structural and mechanistic determinants of c-di-GMP signalling

(2009) Tilman Schirmer et al.   NATURE REVIEWS MICROBIOLOGY

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome

(2009) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct classes of red/far-red photochemistry within the phytochrome superfamily

(2009) N. C. Rockwell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mammalian Expression of Infrared Fluorescent Proteins Engineered from a Bacterial Phytochrome

(2009) X. Shu et al.   SCIENCE

A Second Conserved GAF Domain Cysteine Is Required for the Blue/Green Photoreversibility of Cyanobacteriochrome Tlr0924 fromThermosynechococcus elongatus†

(2008) Nathan C. Rockwell et al.   BIOCHEMISTRY

Photoregulation of Cellular Morphology during Complementary Chromatic Adaptation Requires Sensor-Kinase-Class Protein RcaE in Fremyella diplosiphon

(2008) J. R. Bordowitz et al.   JOURNAL OF BACTERIOLOGY

Characterization of Two Thermostable Cyanobacterial Phytochromes Reveals Global Movements in the Chromophore-binding Domain during Photoconversion

(2008) Andrew T. Ulijasz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Phycoerythrobilin Synthase (PebS) of a Marine Virus

(2008) Thorben Dammeyer et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mutational Analysis ofDeinococcus radioduransBacteriophytochrome Reveals Key Amino Acids Necessary for the Photochromicity and Proton Exchange Cycle of Phytochromes

(2008) Jeremiah R. Wagner et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Solution Structure of a Cyanobacterial Phytochrome GAF Domain in the Red-Light-Absorbing Ground State

(2008) Gabriel Cornilescu et al.   JOURNAL OF MOLECULAR BIOLOGY

A Novel Photoactive GAF Domain of Cyanobacteriochrome AnPixJ That Shows Reversible Green/Red Photoconversion

(2008) Rei Narikawa et al.   JOURNAL OF MOLECULAR BIOLOGY

Design and Signaling Mechanism of Light-Regulated Histidine Kinases

(2008) Andreas Möglich et al.   JOURNAL OF MOLECULAR BIOLOGY

Heteronuclear NMR Investigation on the Structure and Dynamics of the Chromophore Binding Pocket of the Cyanobacterial Phytochrome Cph1

(2008) Janina Hahn et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Characterization of the photoactive GAF domain of the CikA homolog (SyCikA, Slr1969) of the cyanobacterium Synechocystis sp. PCC 6803

(2008) Rei Narikawa et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Function and distribution of bilin biosynthesis enzymes in photosynthetic organisms

(2008) Thorben Dammeyer et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Cyanobacteriochromes: a new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteria

(2008) Masahiko Ikeuchi et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Bacterial bilin- and flavin-binding photoreceptors

(2008) A. Losi et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Bacteriophytochromes in anoxygenic photosynthetic bacteria

(2008) Eric Giraud et al.   PHOTOSYNTHESIS RESEARCH

Cyanobacteriochrome CcaS is the green light receptor that induces the expression of phycobilisome linker protein

(2008) Y. Hirose et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Light-induced chromophore activity and signal transduction in phytochromes observed by 13C and 15N magic-angle spinning NMR

(2008) T. Rohmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The structure of a complete phytochrome sensory module in the Pr ground state

(2008) L.-O. Essen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: Photoconversion and signal transduction

(2008) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Light-activated DNA binding in a designed allosteric protein

(2008) D. Strickland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dual role for a bacteriophytochrome in the bioenergetic control of Rhodopsdeudomonas palustris: Enhancement of photosystem synthesis and limitation of respiration

(2007) Mila Kojadinovic et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS