Spreading Winge and flying high: The evolutionary importance of polyploidy after a century of study

Most Compositae (Asteraceae) are descendants of a paleohexaploid and all share a paleotetraploid ancestor with the Calyceraceae

(2016) Michael S. Barker et al.   AMERICAN JOURNAL OF BOTANY

Ecological distributions, phenological isolation, and genetic structure in sympatric and parapatric populations of the Larrea tridentata polyploid complex

(2016) Robert G. Laport et al.   AMERICAN JOURNAL OF BOTANY

How diploidization turned a tetraploid into a pseudotriploid

(2016) Terezie Mandáková et al.   AMERICAN JOURNAL OF BOTANY

Is hybridization driving the evolution of climatic niche in Alyssum montanum

(2016) Nils Arrigo et al.   AMERICAN JOURNAL OF BOTANY

Strongly asymmetric hybridization barriers shape the origin of a new polyploid species and its hybrid ancestor

(2016) Mario Vallejo-Marín et al.   AMERICAN JOURNAL OF BOTANY

A reexamination of the North American Crepis agamic complex and comparison with the findings of Babcock and Stebbins’ classic biosystematic monograph

(2016) Christopher J. Sears et al.   AMERICAN JOURNAL OF BOTANY

Evaluating the role of genome downsizing and size thresholds from genome size distributions in angiosperms

(2016) Rosana Zenil-Ferguson et al.   AMERICAN JOURNAL OF BOTANY

Species interactions and plant polyploidy

(2016) Kari A. Segraves et al.   AMERICAN JOURNAL OF BOTANY

Species-rich and polyploid-poor: Insights into the evolutionary role of whole-genome duplication from the Cape flora biodiversity hotspot

(2016) Kenneth C. Oberlander et al.   AMERICAN JOURNAL OF BOTANY

Deciphering the evolutionary interplay between subgenomes following polyploidy: A paleogenomics approach in grasses

(2016) Jérôme Salse   AMERICAN JOURNAL OF BOTANY

Heteroploid Knautia drymeia includes K. gussonei and cannot be separated into diagnosable subspecies

(2016) Ivana Rešetnik et al.   AMERICAN JOURNAL OF BOTANY

Transposable element evolution in the allotetraploid Capsella bursa-pastoris

(2016) J. Arvid Ågren et al.   AMERICAN JOURNAL OF BOTANY

Phylogenetic evidence for cladogenetic polyploidization in land plants

(2016) Shing H. Zhan et al.   AMERICAN JOURNAL OF BOTANY

Direct vs. indirect effects of whole-genome duplication on prezygotic isolation in Chamerion angustifolium : Implications for rapid speciation

(2016) Brian C. Husband et al.   AMERICAN JOURNAL OF BOTANY

Single nucleotide polymorphism discovery via genotyping by sequencing to assess population genetic structure and recurrent polyploidization in Andropogon gerardii

(2016) Christine A. McAllister et al.   AMERICAN JOURNAL OF BOTANY

Flower power and the mustard bomb: Comparative analysis of gene and genome duplications in glucosinolate biosynthetic pathway evolution in Cleomaceae and Brassicaceae

(2016) Erik van den Bergh et al.   AMERICAN JOURNAL OF BOTANY

Critical factors in the establishment of allopolyploids

(2016) Norma L. Fowler et al.   AMERICAN JOURNAL OF BOTANY

Polyploidy: Pitfalls and paths to a paradigm

(2016) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Polyploidy and sexual system in angiosperms: Is there an association?

(2016) Lior Glick et al.   AMERICAN JOURNAL OF BOTANY

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

(2016) Jeremy Pasquier et al.   BMC GENOMICS

Genomic legacies of the progenitors and the evolutionary consequences of allopolyploidy

(2016) Kim A Steige et al.   CURRENT OPINION IN PLANT BIOLOGY

The wondrous cycles of polyploidy in plants

(2015) Jonathan F. Wendel   AMERICAN JOURNAL OF BOTANY

Patterns of Gene Conversion in Duplicated Yeast Histones Suggest Strong Selection on a Coadapted Macromolecular Complex

(2015) Kathy Scienski et al.   Genome Biology and Evolution

Spider Transcriptomes Identify Ancient Large-Scale Gene Duplication Event Potentially Important in Silk Gland Evolution

(2015) Thomas H. Clarke et al.   Genome Biology and Evolution

Persistence of Subgenomes in Paleopolyploid Cotton after 60 My of Evolution

(2015) Simon Renny-Byfield et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transcriptome-derived evidence supports recent polyploidization and a major phylogeographic division in Trithuria submersa (Hydatellaceae, Nymphaeales)

(2015) Isabel Marques et al.   NEW PHYTOLOGIST

On the relative abundance of autopolyploids and allopolyploids

(2015) Michael S. Barker et al.   NEW PHYTOLOGIST

The butterfly plant arms-race escalated by gene and genome duplications

(2015) Patrick P. Edger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Early genome duplications in conifers and other seed plants

(2015) Z. Li et al.   Science Advances

Ever since Klekowski: Testing a set of radical hypotheses revives the genetics of ferns and lycophytes

(2014) C. H. Haufler   AMERICAN JOURNAL OF BOTANY

The polyploidy revolution then...and now: Stebbins revisited

(2014) D. E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Polyploid Formation Shapes Flowering Plant Diversity

(2014) Samuel V. Scarpino et al.   AMERICAN NATURALIST

Dosage, duplication, and diploidization: clarifying the interplay of multiple models for duplicate gene evolution over time

(2014) Gavin C Conant et al.   CURRENT OPINION IN PLANT BIOLOGY

Insights into Three Whole-Genome Duplications Gleaned from the Paramecium caudatum Genome Sequence

(2014) Casey L. McGrath et al.   GENETICS

Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary

(2014) Kevin Vanneste et al.   GENOME RESEARCH

Comparative Genomics as a Time Machine: How Relative Gene Dosage and Metabolic Requirements Shaped the Time-dependent Resolution of Yeast Polyploidy

(2014) Gavin C. Conant   MOLECULAR BIOLOGY AND EVOLUTION

Methods for studying polyploid diversification and the dead end hypothesis: a reply to Soltiset al. (2014)

(2014) Itay Mayrose et al.   NEW PHYTOLOGIST

Are polyploids really evolutionary dead-ends (again)? A critical reappraisal of Mayroseet al. (2011)

(2014) Douglas E. Soltis et al.   NEW PHYTOLOGIST

Extensive Translational Regulation of Gene Expression in an Allopolyploid (Glycine dolichocarpa)

(2014) J. E. Coate et al.   PLANT CELL

Polyploid Evolution of the Brassicaceae during the Cenozoic Era

(2014) Sateesh Kagale et al.   PLANT CELL

Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids

(2014) M. R. Woodhouse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

(2014) Shengyi Liu et al.   Nature Communications

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

(2014) Camille Berthelot et al.   Nature Communications

Sex Determination: Why So Many Ways of Doing It?

(2014) Doris Bachtrog et al.   PLOS BIOLOGY

Joint assembly and genetic mapping of the Atlantic horseshoe crab genome reveals ancient whole genome duplication

(2014) Carlos W Nossa et al.   GigaScience

Revisiting the Dioecy-Polyploidy Association: Alternate Pathways and Research Opportunities

(2013) T.-L. Ashman et al.   CYTOGENETIC AND GENOME RESEARCH

Two Evolutionarily Distinct Classes of Paleopolyploidy

(2013) Olivier Garsmeur et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Tarenaya hassleriana Genome Provides Insight into Reproductive Trait and Genome Evolution of Crucifers

(2013) S. Cheng et al.   PLANT CELL

Ohnologs are overrepresented in pathogenic copy number mutations

(2013) A. McLysaght et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Amborella Genome and the Evolution of Flowering Plants

(2013) et al.   SCIENCE

Impact of gene gains, losses and duplication modes on the origin and diversification of vertebrates

(2013) Cristian Cañestro et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

The Roles of Whole-Genome and Small-Scale Duplications in the Functional Specialization of Saccharomyces cerevisiae Genes

(2013) Mario A. Fares et al.   PLoS Genetics

Identifying multiple origins of polyploid taxa: A multilocus study of the hybrid cloak fern (Astrolepis integerrima ; Pteridaceae)

(2012) James B. Beck et al.   AMERICAN JOURNAL OF BOTANY

Rarely successful polyploids and their legacy in plant genomes

(2012) Nils Arrigo et al.   CURRENT OPINION IN PLANT BIOLOGY

Altered Patterns of Fractionation and Exon Deletions in Brassica rapa Support a Two-Step Model of Paleohexaploidy

(2012) H. Tang et al.   GENETICS

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

The long wait for hybrid sterility in flowering plants

(2012) Donald A. Levin   NEW PHYTOLOGIST

A genome triplication associated with early diversification of the core eudicots

(2012) Yuannian Jiao et al.   GENOME BIOLOGY

A Unified Model of Autopolyploid Establishment and Evolution

(2011) Benjamin P. Oswald et al.   AMERICAN NATURALIST

Comparative Analysis of Chromosome Counts Infers Three Paleopolyploidies in the Mollusca

(2011) Nathaniel M. Hallinan et al.   Genome Biology and Evolution

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus

(2011) E. Rodgers-Melnick et al.   GENOME RESEARCH

Ancestral polyploidy in seed plants and angiosperms

(2011) Yuannian Jiao et al.   NATURE

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

Recently Formed Polyploid Plants Diversify at Lower Rates

(2011) I. Mayrose et al.   SCIENCE

Ancient genome duplications during the evolution of kiwifruit (Actinidia) and related Ericales

(2010) Tao Shi et al.   ANNALS OF BOTANY

Unfurling Fern Biology in the Genomics Age

(2010) Michael S. Barker et al.   BIOSCIENCE

The collapse of gene complement following whole genome duplication

(2010) David Sankoff et al.   BMC GENOMICS

Karyotype and Identification of All Homoeologous Chromosomes of Allopolyploid Brassica napus and Its Diploid Progenitors

(2010) Z. Xiong et al.   GENETICS

ÜBER CHROMOSOMENVERMEHRUNG IN GALEOPSIS-KREUZUNGEN UND IHRE PHYLOGENETISCHE BEDEUTUNG

(2010) ARNE MÜNTZING   HEREDITAS

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

The impact of the triploid block on the origin and evolution of polyploid plants

(2010) Claudia Köhler et al.   TRENDS IN GENETICS

Polyploidy and angiosperm diversification

(2009) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes

(2009) Francesco Santini et al.   BMC EVOLUTIONARY BIOLOGY

Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes

(2009) Patrick P. Edger et al.   CHROMOSOME RESEARCH

Paleopolyploidy in the Brassicales: Analyses of the Cleome Transcriptome Elucidate the History of Genome Duplications in Arabidopsis and Other Brassicales

(2009) Michael S. Barker et al.   Genome Biology and Evolution

Epigenetic silencing of transposable elements: A trade-off between reduced transposition and deleterious effects on neighboring gene expression

(2009) J. D. Hollister et al.   GENOME RESEARCH

Angiosperm genome comparisons reveal early polyploidy in the monocot lineage

(2009) H. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The frequency of polyploid speciation in vascular plants

(2009) T. E. Wood et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Genetics of Genome Merger and Doubling in Plants

(2008) Jeff J. Doyle et al.   Annual Review of Genetics

Multiple Paleopolyploidizations during the Evolution of the Compositae Reveal Parallel Patterns of Duplicate Gene Retention after Millions of Years

(2008) M. S. Barker et al.   MOLECULAR BIOLOGY AND EVOLUTION