Single nucleotide polymorphism discovery via genotyping by sequencing to assess population genetic structure and recurrent polyploidization in Andropogon gerardii

The polyploidy revolution then...and now: Stebbins revisited

(2014) D. E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Ecotypes of an ecologically dominant prairie grass (Andropogon gerardii) exhibit genetic divergence across the U.S. Midwest grasslands' environmental gradient

(2014) Miranda M. Gray et al.   MOLECULAR ECOLOGY

Recent novel approaches for population genomics data analysis

(2014) Kimberly R. Andrews et al.   MOLECULAR ECOLOGY

Origin and systematic position of Jacobaea vulgaris (Asteraceae) octoploids: genetic and morphological evidence

(2014) Iva Hodálová et al.   PLANT SYSTEMATICS AND EVOLUTION

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Determining population structure and hybridization for two iris species

(2014) Jennafer A. P. Hamlin et al.   Ecology and Evolution

A Bountiful Harvest: Genomic Insights into Crop Domestication Phenotypes

(2013) Kenneth M. Olsen et al.   Annual Review of Plant Biology

ADAPTATION OF DIPLOID AND TETRAPLOIDCHAMERION ANGUSTIFOLIUMTO ELEVATION BUT NOT LOCAL ENVIRONMENT

(2013) Sara L. Martin et al.   EVOLUTION

Adaptive evolution during an ongoing range expansion: the invasive bank vole (Myodes glareolus) in Ireland

(2013) Thomas A. White et al.   MOLECULAR ECOLOGY

Recent progress and challenges in population genetics of polyploid organisms: an overview of current state-of-the-art molecular and statistical tools

(2013) France Dufresne et al.   MOLECULAR ECOLOGY

Switchgrass Genomic Diversity, Ploidy, and Evolution: Novel Insights from a Network-Based SNP Discovery Protocol

(2013) Fei Lu et al.   PLoS Genetics

Polyploidy associated with altered and broader ecological niches in the Claytonia perfoliata (Portulacaceae) species complex

(2012) Patrick J. McIntyre   AMERICAN JOURNAL OF BOTANY

Cytogeography of the Humifusa clade of Opuntia s.s. Mill. 1754 (Cactaceae, Opuntioideae, Opuntieae): correlations with pleistocene refugia and morphological traits in a polyploid complex

(2012) Lucas Majure et al.   Comparative Cytogenetics

Gamma Paleohexaploidy in the Stem Lineage of Core Eudicots: Significance for MADS-Box Gene and Species Diversification

(2012) Dries Vekemans et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population genomics based on low coverage sequencing: how low should we go?

(2012) C. Alex Buerkle et al.   MOLECULAR ECOLOGY

EvolView, an online tool for visualizing, annotating and managing phylogenetic trees

(2012) Huangkai Zhang et al.   NUCLEIC ACIDS RESEARCH

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

Increased Phenotypic Plasticity to Climate May Have Boosted the Invasion Success of Polyploid Centaurea stoebe

(2012) Min A. Hahn et al.   PLoS One

A Unified Model of Autopolyploid Establishment and Evolution

(2011) Benjamin P. Oswald et al.   AMERICAN NATURALIST

The more the better? The role of polyploidy in facilitating plant invasions

(2011) M. te Beest et al.   ANNALS OF BOTANY

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Production of viable male unreduced gametes in Brassica interspecific hybrids is genotype specific and stimulated by cold temperatures

(2011) Annaliese S Mason et al.   BMC PLANT BIOLOGY

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Evolutionary consequences of autopolyploidy

(2010) Christian Parisod et al.   NEW PHYTOLOGIST

Rapid Genomic Characterization of the Genus Vitis

(2010) Sean Myles et al.   PLoS One

Hierarchical classification of switchgrass genotypes using SSR and chloroplast sequences: ecotypes, ploidies, gene pools, and cultivars

(2010) J. E. Zalapa et al.   THEORETICAL AND APPLIED GENETICS

PCA-based population structure inference with generic clustering algorithms

(2009) Chih Lee et al.   BMC BIOINFORMATICS

The Sorghum bicolor genome and the diversification of grasses

(2009) Andrew H. Paterson et al.   NATURE

Evidence for multiple, autoploid origins of agamospermous populations in Eupatorium sessilifolium (Asteraceae)

(2009) Kunsiri C. Grubbs et al.   PLANT SYSTEMATICS AND EVOLUTION

The frequency of polyploid speciation in vascular plants

(2009) T. E. Wood et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Origins, distribution, and local co-occurrence of polyploid cytotypes in Solidago altissima (Asteraceae)

(2008) Kristy Halverson et al.   AMERICAN JOURNAL OF BOTANY

RAPID ADAPTIVE DIVERGENCE IN NEW WORLDACHILLEA, AN AUTOPOLYPLOID COMPLEX OF ECOLOGICAL RACES

(2007) Justin Ramsey et al.   EVOLUTION