Chromosomal fusion and life history-associated genomic variation contribute to within-river local adaptation of Atlantic salmon
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Title
Chromosomal fusion and life history-associated genomic variation contribute to within-river local adaptation of Atlantic salmon
Authors
Keywords
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Journal
MOLECULAR ECOLOGY
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2018-12-02
DOI
10.1111/mec.14965
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Note: Only part of the references are listed.- Genomic signatures of fine-scale local selection in Atlantic salmon suggest involvement of sexual maturation, energy homeostasis and immune defence-related genes
- (2018) Victoria L. Pritchard et al. MOLECULAR ECOLOGY
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- On the roles of landscape heterogeneity and environmental variation in determining population genomic structure in a dendritic system
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- Eco-Evolutionary Genomics of Chromosomal Inversions
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- Assessing the outcomes of stocking hatchery-reared juveniles in the presence of wild Atlantic salmon
- (2017) Ben G. Wallace et al. ENVIRONMENTAL BIOLOGY OF FISHES
- Fragile sites, dysfunctional telomere and chromosome fusions: What is 5S rDNA role?
- (2017) Alain Victor Barros et al. GENE
- WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas
- (2017) Stephen E. Fick et al. INTERNATIONAL JOURNAL OF CLIMATOLOGY
- Genome architecture enables local adaptation of Atlantic cod despite high connectivity
- (2017) Julia M. I. Barth et al. MOLECULAR ECOLOGY
- Ancient chromosomal rearrangement associated with local adaptation of a postglacially colonized population of Atlantic Cod in the northwest Atlantic
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- Characterization of natural variation in North American Atlantic Salmon populations (Salmonidae: Salmo salar ) at a locus with a major effect on sea age
- (2017) Henrik Kusche et al. Ecology and Evolution
- Range-wide parallel climate-associated genomic clines in Atlantic salmon
- (2017) Nicholas W. Jeffery et al. Royal Society Open Science
- Identification of a single genomic region associated with seasonal river return timing in adult Scottish Atlantic salmon (Salmo salar), using a genome-wide association study
- (2017) Eef Cauwelier et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Estimating contemporary effective population size in non-model species using linkage disequilibrium across thousands of loci
- (2016) R K Waples et al. HEREDITY
- Making sense of the relationships between Ne, Nb and Nc towards defining conservation thresholds in Atlantic salmon (Salmo salar)
- (2016) A-L Ferchaud et al. HEREDITY
- From population genomics to conservation and management: a workflow for targeted analysis of markers identified using genome-wide approaches in Atlantic salmonSalmo salar
- (2016) T. Aykanat et al. JOURNAL OF FISH BIOLOGY
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- (2016) Martin Kapun et al. MOLECULAR BIOLOGY AND EVOLUTION
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- (2016) Laura Benestan et al. MOLECULAR ECOLOGY
- pcadapt: anRpackage to perform genome scans for selection based on principal component analysis
- (2016) Keurcien Luu et al. Molecular Ecology Resources
- The Atlantic salmon genome provides insights into rediploidization
- (2016) Sigbjørn Lien et al. NATURE
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- (2016) Paul R. Berg et al. Scientific Reports
- Modern Approaches to Local Adaptation
- (2015) Michael C. Whitlock AMERICAN NATURALIST
- Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of FST
- (2015) Michael C. Whitlock et al. AMERICAN NATURALIST
- Chromosomal polymorphism in mammals: an evolutionary perspective
- (2015) Gauthier Dobigny et al. BIOLOGICAL REVIEWS
- Genome-Wide Scan for Adaptive Divergence and Association with Population-Specific Covariates
- (2015) M. Gautier GENETICS
- Adaptation to Low Salinity Promotes Genomic Divergence in Atlantic Cod ( Gadus morhua L.)
- (2015) Paul R. Berg et al. Genome Biology and Evolution
- Low but significant genetic differentiation underlies biologically meaningful phenotypic divergence in a large Atlantic salmon population
- (2015) Tutku Aykanat et al. MOLECULAR ECOLOGY
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- (2015) Benjamin C. Hecht et al. MOLECULAR ECOLOGY
- Seven common mistakes in population genetics and how to avoid them
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- Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon
- (2015) Nicola J. Barson et al. NATURE
- Following the footprints of polymorphic inversions on SNP data: from detection to association tests
- (2015) Alejandro Cáceres et al. NUCLEIC ACIDS RESEARCH
- Second-generation PLINK: rising to the challenge of larger and richer datasets
- (2015) Christopher C Chang et al. GigaScience
- LOCAL ADAPTATION AND THE EVOLUTION OF CHROMOSOME FUSIONS
- (2014) Rafael F. Guerrero et al. EVOLUTION
- Loss of genetic integrity in wild lake trout populations following stocking: insights from an exhaustive study of 72 lakes from Québec, Canada
- (2014) Eliane Valiquette et al. Evolutionary Applications
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- (2013) Matthew L. Keefer et al. REVIEWS IN FISH BIOLOGY AND FISHERIES
- Identification of polymorphic inversions from genotypes
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- Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
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- Linkage disequilibrium estimates of contemporaryNeusing highly variable genetic markers: a largely untapped resource for applied conservation and evolution
- (2009) Robin S. Waples et al. Evolutionary Applications
- Age Structure, Changing Demography and Effective Population Size in Atlantic Salmon ( Salmo salar )
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- Fast model-based estimation of ancestry in unrelated individuals
- (2009) D. H. Alexander et al. GENOME RESEARCH
- Sixty years of anthropogenic pressure: a spatio-temporal genetic analysis of brown trout populations subject to stocking and population declines
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- Comparative survey of within-river genetic structure in Atlantic salmon; relevance for management and conservation
- (2008) Mélanie Dionne et al. CONSERVATION GENETICS
- A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective
- (2008) M. Foll et al. GENETICS
- Landscape genetics and hierarchical genetic structure in Atlantic salmon: the interaction of gene flow and local adaptation
- (2008) MÉLANIE DIONNE et al. MOLECULAR ECOLOGY
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