The Influence of Habitat and Phylogeny on the Skin Microbiome of Amphibians in Guatemala and Mexico

Skin Microbiomes of California Terrestrial Salamanders Are Influenced by Habitat More Than Host Phylogeny

(2018) Alicia K. Bird et al.   Frontiers in Microbiology

Effects of host species and environment on the skin microbiome of Plethodontid salamanders

(2017) Carly R. Muletz Wolz et al.   JOURNAL OF ANIMAL ECOLOGY

Intraspecific Variation in the Skin-Associated Microbiome of a Terrestrial Salamander

(2017) Sofia R. Prado-Irwin et al.   MICROBIAL ECOLOGY

Inhibition of Fungal Pathogens across Genotypes and Temperatures by Amphibian Skin Bacteria

(2017) Carly R. Muletz-Wolz et al.   Frontiers in Microbiology

Host Ecology Rather Than Host Phylogeny Drives Amphibian Skin Microbial Community Structure in the Biodiversity Hotspot of Madagascar

(2017) Molly C. Bletz et al.   Frontiers in Microbiology

Skin bacterial diversity of Panamanian frogs is associated with host susceptibility and presence of Batrachochytrium dendrobatidis

(2016) Eria A Rebollar et al.   ISME Journal

Improving the estimation of genetic distances from Next-Generation Sequencing data

(2015) Filipe G. Vieira et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Antifungal isolates database of amphibian skin-associated bacteria and function against emerging fungal pathogens

(2015) Douglas C. Woodhams et al.   ECOLOGY

Linking genetic and environmental factors in amphibian disease risk

(2015) Anna E. Savage et al.   Evolutionary Applications

Inhibitory bacteria reduce fungi on early life stages of endangered Colorado boreal toads (Anaxyrus boreas)

(2015) Jordan G Kueneman et al.   ISME Journal

Composition of symbiotic bacteria predicts survival in Panamanian golden frogs infected with a lethal fungus

(2015) M. H. Becker et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Averting a North American biodiversity crisis

(2015) T. A. Yap et al.   SCIENCE

Seasonal and ontogenetic variation of skin microbial communities and relationships to natural disease dynamics in declining amphibians

(2015) Ana V. Longo et al.   Royal Society Open Science

Similarity and differentiation between bacteria associated with skin of salamanders (Plethodon jordani) and free-living assemblages

(2014) Benjamin M. Fitzpatrick et al.   FEMS MICROBIOLOGY ECOLOGY

Amphibian skin may select for rare environmental microbes

(2014) Jenifer B Walke et al.   ISME Journal

The pathogenBatrachochytrium dendrobatidisdisturbs the frog skin microbiome during a natural epidemic and experimental infection

(2014) Andrea J. Jani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Recent introduction of a chytrid fungus endangers Western Palearctic salamanders

(2014) A. Martel et al.   SCIENCE

Phylogenetic signal in the community structure of host-specific microbiomes of tropical marine sponges

(2014) Cole G. Easson et al.   Frontiers in Microbiology

Mitigating amphibian chytridiomycosis with bioaugmentation: characteristics of effective probiotics and strategies for their selection and use

(2013) Molly C. Bletz et al.   ECOLOGY LETTERS

Duplex Real-Time PCR for Rapid Simultaneous Detection of Batrachochytrium dendrobatidis and Batrachochytrium salamandrivorans in Amphibian Samples

(2013) M. Blooi et al.   JOURNAL OF CLINICAL MICROBIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The amphibian skin-associated microbiome across species, space and life history stages

(2013) Jordan G. Kueneman et al.   MOLECULAR ECOLOGY

Batrachochytrium salamandrivorans sp. nov. causes lethal chytridiomycosis in amphibians

(2013) A. Martel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EMPeror: a tool for visualizing high-throughput microbial community data

(2013) Yoshiki Vázquez-Baeza et al.   GigaScience

Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales

(2012) Ke Bi et al.   BMC GENOMICS

Co-habiting amphibian species harbor unique skin bacterial communities in wild populations

(2011) Valerie J McKenzie et al.   ISME Journal

Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys

(2011) Jeffrey J Werner et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Tropical amphibian populations experience higher disease risk in natural habitats

(2011) C. G. Becker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coincident mass extirpation of neotropical amphibians with the emergence of the infectious fungal pathogen Batrachochytrium dendrobatidis

(2011) T. L. Cheng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Enzootic and epizootic dynamics of the chytrid fungal pathogen of amphibians

(2010) C. J. Briggs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics of an emerging disease drive large-scale amphibian population extinctions

(2010) V. T. Vredenburg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus

(2009) Reid N Harris et al.   ISME Journal

Are we in the midst of the sixth mass extinction? A view from the world of amphibians

(2008) D. B. Wake et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA