Skin bacterial diversity of Panamanian frogs is associated with host susceptibility and presence of Batrachochytrium dendrobatidis

Antifungal isolates database of amphibian skin-associated bacteria and function against emerging fungal pathogens

(2015) Douglas C. Woodhams et al.   ECOLOGY

Phylogenetic distribution of symbiotic bacteria from Panamanian amphibians that inhibit growth of the lethal fungal pathogenBatrachochytrium dendrobatidis

(2015) Matthew H. Becker et al.   MOLECULAR ECOLOGY

Composition of symbiotic bacteria predicts survival in Panamanian golden frogs infected with a lethal fungus

(2015) M. H. Becker et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Panamanian frog species host unique skin bacterial communities

(2015) Lisa K. Belden et al.   Frontiers in Microbiology

The microbiome of uncontacted Amerindians

(2015) J. C. Clemente et al.   Science Advances

Terrestrial Dispersal and Potential Environmental Transmission of the Amphibian Chytrid Fungus (Batrachochytrium dendrobatidis)

(2015) Jonathan E. Kolby et al.   PLoS One

The effect of captivity on the cutaneous bacterial community of the critically endangered Panamanian golden frog (Atelopus zeteki)

(2014) Matthew H. Becker et al.   BIOLOGICAL CONSERVATION

Similarity and differentiation between bacteria associated with skin of salamanders (Plethodon jordani) and free-living assemblages

(2014) Benjamin M. Fitzpatrick et al.   FEMS MICROBIOLOGY ECOLOGY

Amphibian skin may select for rare environmental microbes

(2014) Jenifer B Walke et al.   ISME Journal

A single genus in the gut microbiome reflects host preference and specificity

(2014) A Murat Eren et al.   ISME Journal

Identifying the core microbial community in the gut of fungus-growing termites

(2014) Saria Otani et al.   MOLECULAR ECOLOGY

Stability of Microbiota Facilitated by Host Immune Regulation: Informing Probiotic Strategies to Manage Amphibian Disease

(2014) Denise Küng et al.   PLoS One

Ex situ Diet Influences the Bacterial Community Associated with the Skin of Red-Eyed Tree Frogs (Agalychnis callidryas)

(2014) Rachael E. Antwis et al.   PLoS One

The Lethal Fungus Batrachochytrium dendrobatidis Is Present in Lowland Tropical Forests of Far Eastern Panamá

(2014) Eria A. Rebollar et al.   PLoS One

The pathogenBatrachochytrium dendrobatidisdisturbs the frog skin microbiome during a natural epidemic and experimental infection

(2014) Andrea J. Jani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Disruption of the gut microbiome as a risk factor for microbial infections

(2013) Arya Khosravi et al.   CURRENT OPINION IN MICROBIOLOGY

Biofilm Matrix and Its Regulation in Pseudomonas aeruginosa

(2013) Qing Wei et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders (Plethodon cinereus)

(2013) Andrew H Loudon et al.   ISME Journal

The amphibian skin-associated microbiome across species, space and life history stages

(2013) Jordan G. Kueneman et al.   MOLECULAR ECOLOGY

Distinct antimicrobial peptide expression determines host species-specific bacterial associations

(2013) S. Franzenburg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

From Animalcules to an Ecosystem: Application of Ecological Concepts to the Human Microbiome

(2012) Noah Fierer et al.   Annual Review of Ecology Evolution and Systematics

Changes in cutaneous microbial abundance with sloughing: possible implications for infection and disease in amphibians

(2012) EA Meyer et al.   DISEASES OF AQUATIC ORGANISMS

Fluorescent Microscopy of Viable Batrachochytrium dendrobatidis

(2012) Leon R. Friesen et al.   JOURNAL OF PARASITOLOGY

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Surviving Chytridiomycosis: Differential Anti-Batrachochytrium dendrobatidis Activity in Bacterial Isolates from Three Lowland Species of Atelopus

(2012) Sandra V. Flechas et al.   PLoS One

Protection of Arabidopsis thaliana against Leaf-Pathogenic Pseudomonas syringae by Sphingomonas Strains in a Controlled Model System

(2011) Gerd Innerebner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Structural diversity and species distribution of host-defense peptides in frog skin secretions

(2011) J. Michael Conlon   CELLULAR AND MOLECULAR LIFE SCIENCES

Bacterial symbionts as mediators of ecologically important traits of insect hosts

(2011) HEIKE FELDHAAR   ECOLOGICAL ENTOMOLOGY

Co-habiting amphibian species harbor unique skin bacterial communities in wild populations

(2011) Valerie J McKenzie et al.   ISME Journal

Shifts in bacterial communities of two caribbean reef-building coral species affected by white plague disease

(2011) Anny Cárdenas et al.   ISME Journal

Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice

(2011) Claudia Knief et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Cutaneous Bacteria of the Redback Salamander Prevent Morbidity Associated with a Lethal Disease

(2010) Matthew H. Becker et al.   PLoS One

Epidemic disease decimates amphibian abundance, species diversity, and evolutionary history in the highlands of central Panama

(2010) A. J. Crawford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In an early branching metazoan, bacterial colonization of the embryo is controlled by maternal antimicrobial peptides

(2010) S. Fraune et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Use of Calcofluor White for Detection, Identification, and Quantification of Phytoplanktonic Fungal Parasites

(2009) S. Rasconi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The role of amphibian antimicrobial peptides in protection of amphibians from pathogens linked to global amphibian declines

(2009) Louise A. Rollins-Smith   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus

(2009) Reid N Harris et al.   ISME Journal

Enteric defensins are essential regulators of intestinal microbial ecology

(2009) Nita H Salzman et al.   NATURE IMMUNOLOGY

Batrachochytriumdendrobatidisinfection patterns among Panamanian amphibian species, habitats and elevations during epizootic and enzootic stages

(2008) FMR Brem et al.   DISEASES OF AQUATIC ORGANISMS

Chytridiomycosis and Amphibian Population Declines Continue to Spread Eastward in Panama

(2008) Douglas C. Woodhams et al.   EcoHealth

Amphibian Chemical Defense: Antifungal Metabolites of the Microsymbiont Janthinobacterium lividum on the Salamander Plethodon cinereus

(2008) Robert M. Brucker et al.   JOURNAL OF CHEMICAL ECOLOGY