PDRLGB: precise DNA-binding residue prediction using a light gradient boosting machine

A Personalized QoS Prediction Approach for CPS Service Recommendation Based on Reputation and Location-Aware Collaborative Filtering

(2018) Li Kuang et al.   SENSORS

Local-DPP: An improved DNA-binding protein prediction method by exploring local evolutionary information

(2017) Leyi Wei et al.   INFORMATION SCIENCES

Prediction of Protein S-Sulfenylation Sites Using a Deep Belief Network

(2017) Lulu Nie et al.   Current Bioinformatics

Classification of Small GTPases with Hybrid Protein Features and Advanced Machine Learning Techniques

(2017) Zhijun Liao et al.   Current Bioinformatics

PredRSA: a gradient boosted regression trees approach for predicting protein solvent accessibility

(2016) Chao Fan et al.   BMC BIOINFORMATICS

Dynamic epigenetic mode analysis using spatial temporal clustering

(2016) YangLan Gan et al.   BMC BIOINFORMATICS

Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy

(2016) Quan Zou et al.   BMC Systems Biology

nDNA-prot: identification of DNA-binding proteins based on unbalanced classification

(2014) Li Song et al.   BMC BIOINFORMATICS

PredHS: a web server for predicting protein–protein interaction hot spots by using structural neighborhood properties

(2014) Lei Deng et al.   NUCLEIC ACIDS RESEARCH

PreDNA: accurate prediction of DNA-binding sites in proteins by integrating sequence and geometric structure information

(2013) Tao Li et al.   BIOINFORMATICS

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Sequence-Based Prediction of DNA-Binding Residues in Proteins with Conservation and Correlation Information

(2012) Xin Ma et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

DR_bind: a web server for predicting DNA-binding residues from the protein structure based on electrostatics, evolution and geometry

(2012) Yao Chi Chen et al.   NUCLEIC ACIDS RESEARCH

BindN+ for accurate prediction of DNA and RNA-binding residues from protein sequence features

(2010) Liangjiang Wang et al.   BMC Systems Biology

DNA recognition and the precleavage state during single-stranded DNA transposition in D. radiodurans

(2010) Alison Burgess Hickman et al.   EMBO JOURNAL

DNABINDPROT: fluctuation-based predictor of DNA-binding residues within a network of interacting residues

(2010) Pemra Ozbek et al.   NUCLEIC ACIDS RESEARCH

NAPS: a residue-level nucleic acid-binding prediction server

(2010) Matthew B. Carson et al.   NUCLEIC ACIDS RESEARCH

Prediction of DNA-binding residues from protein sequence information using random forests

(2009) Liangjiang Wang et al.   BMC GENOMICS