Evidence that ebolaviruses and cuevaviruses have been diverging from marburgviruses since the Miocene

Discovery and Evolution of Bunyavirids in Arctic Phantom Midges and Ancient Bunyavirid-Like Sequences in Insect Genomes

(2014) M. J. Ballinger et al.   JOURNAL OF VIROLOGY

TCS: A New Multiple Sequence Alignment Reliability Measure to Estimate Alignment Accuracy and Improve Phylogenetic Tree Reconstruction

(2014) Jia-Ming Chang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates

(2014) S. Duchene et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Cell Tropism Predicts Long-term Nucleotide Substitution Rates of Mammalian RNA Viruses

(2014) Allison L. Hicks et al.   PLoS Pathogens

A Polymorphism in IRF4 Affects Human Pigmentation through a Tyrosinase-Dependent MITF/TFAP2A Pathway

(2013) Christian Praetorius et al.   CELL

Virus-host co-evolution under a modified nuclear genetic code

(2013) Derek J. Taylor et al.   PeerJ

A glimpse on the pattern of rodent diversification: a phylogenetic approach

(2012) Pierre-Henri Fabre et al.   BMC EVOLUTIONARY BIOLOGY

A Syrian Golden Hamster Model Recapitulating Ebola Hemorrhagic Fever

(2012) Hideki Ebihara et al.   JOURNAL OF INFECTIOUS DISEASES

Molecular Evolution of Viruses of the Family Filoviridae Based on 97 Whole-Genome Sequences

(2012) S. A. Carroll et al.   JOURNAL OF VIROLOGY

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dating an impressive Neotropical radiation: Molecular time estimates for the Sigmodontinae (Rodentia) provide insights into its historical biogeography

(2012) Andrés Parada et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Use of the Syrian Hamster as a New Model of Ebola Virus Disease and Other Viral Hemorrhagic Fevers

(2012) Victoria Wahl-Jensen et al.   Viruses-Basel

Filoviruses are ancient and integrated into mammalian genomes

(2011) Derek J Taylor et al.   BMC EVOLUTIONARY BIOLOGY

Evolutionary maintenance of filovirus-like genes in bat genomes

(2011) Derek J Taylor et al.   BMC EVOLUTIONARY BIOLOGY

Purifying Selection Can Obscure the Ancient Age of Viral Lineages

(2011) Joel O. Wertheim et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mitochondrial Genomes Reveal Slow Rates of Molecular Evolution and the Timing of Speciation in Beavers (Castor), One of the Largest Rodent Species

(2011) Susanne Horn et al.   PLoS One

TAX1BP1, a ubiquitin-binding adaptor protein in innate immunity and beyond

(2011) Lynn Verstrepen et al.   TRENDS IN BIOCHEMICAL SCIENCES

Paleovirology—ghosts and gifts of viruses past

(2011) Maulik R Patel et al.   Current Opinion in Virology

Evaluating the evidence for virus/host co-evolution

(2011) Paul M Sharp et al.   Current Opinion in Virology

Discovery of an Ebolavirus-Like Filovirus in Europe

(2011) Ana Negredo et al.   PLoS Pathogens

Proposal for a revised taxonomy of the family Filoviridae: classification, names of taxa and viruses, and virus abbreviations

(2010) Jens H. Kuhn et al.   ARCHIVES OF VIROLOGY

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

(2010) W. Delport et al.   BIOINFORMATICS

TAX1BP1 and A20 Inhibit Antiviral Signaling by Targeting TBK1-IKKi Kinases

(2010) Kislay Parvatiyar et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Widespread Horizontal Gene Transfer from Double-Stranded RNA Viruses to Eukaryotic Nuclear Genomes

(2010) H. Liu et al.   JOURNAL OF VIROLOGY

Endogenous non-retroviral RNA virus elements in mammalian genomes

(2010) Masayuki Horie et al.   NATURE

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Genomic Fossils Calibrate the Long-Term Evolution of Hepadnaviruses

(2010) Clément Gilbert et al.   PLOS BIOLOGY

Endless Forms Most Viral

(2010) Welkin E. Johnson   PLoS Genetics

Endogenous Viral Elements in Animal Genomes

(2010) Aris Katzourakis et al.   PLoS Genetics

Unexpected Inheritance: Multiple Integrations of Ancient Bornavirus and Ebolavirus/Marburgvirus Sequences in Vertebrate Genomes

(2010) Vladimir A. Belyi et al.   PLoS Pathogens

The evolution of novel fungal genes from non-retroviral RNA viruses

(2009) Derek J Taylor et al.   BMC BIOLOGY

Supraspecies relationships in the subfamily Arvicolinae (Rodentia, Cricetidae): An unexpected result of nuclear gene analysis

(2009) N. I. Abramson et al.   MOLECULAR BIOLOGY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

Inhibition of IRF-3 Activation by VP35 Is Critical for the High Level of Virulence of Ebola Virus

(2008) A. L. Hartman et al.   JOURNAL OF VIROLOGY