Pooled genome-wide CRISPR screening for basal and context-specific fitness gene essentiality in Drosophila cells
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Title
Pooled genome-wide CRISPR screening for basal and context-specific fitness gene essentiality in Drosophila cells
Authors
Keywords
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Journal
eLife
Volume 7, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2018-07-27
DOI
10.7554/elife.36333
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Note: Only part of the references are listed.- Orthologous CRISPR–Cas9 enzymes for combinatorial genetic screens
- (2017) Fadi J Najm et al. NATURE BIOTECHNOLOGY
- Computational correction of copy number effect improves specificity of CRISPR–Cas9 essentiality screens in cancer cells
- (2017) Robin M Meyers et al. NATURE GENETICS
- Combinatorial CRISPR–Cas9 screens for de novo mapping of genetic interactions
- (2017) John Paul Shen et al. NATURE METHODS
- Human gene essentiality
- (2017) István Bartha et al. NATURE REVIEWS GENETICS
- Am I ready for CRISPR? A user's guide to genetic screens
- (2017) John G. Doench NATURE REVIEWS GENETICS
- PICKLES: the database of pooled in-vitro CRISPR knockout library essentiality screens
- (2017) Walter F Lenoir et al. NUCLEIC ACIDS RESEARCH
- Improved detection of synthetic lethal interactions inDrosophilacells using variable dose analysis (VDA)
- (2017) Benjamin E. Housden et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Targeted genetics inDrosophilacell lines: Inserting single transgenes in vitro
- (2016) Sathiya N. Manivannan et al. FLY
- CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes
- (2016) Bastiaan Evers et al. NATURE BIOTECHNOLOGY
- Systematic comparison of CRISPR/Cas9 and RNAi screens for essential genes
- (2016) David W Morgens et al. NATURE BIOTECHNOLOGY
- Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
- (2016) John G Doench et al. NATURE BIOTECHNOLOGY
- A chemical-inducible CRISPR–Cas9 system for rapid control of genome editing
- (2016) Kaiwen Ivy Liu et al. Nature Chemical Biology
- KEGG: new perspectives on genomes, pathways, diseases and drugs
- (2016) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities
- (2015) Traver Hart et al. CELL
- Tools for Targeted Genome Engineering of Established Drosophila Cell Lines
- (2015) L. Cherbas et al. GENETICS
- A Genome-Wide CRISPR Library for High-Throughput Genetic Screening in Drosophila Cells
- (2015) Andrew R. Bassett et al. Journal of Genetics and Genomics
- Small molecule–triggered Cas9 protein with improved genome-editing specificity
- (2015) Kevin M Davis et al. Nature Chemical Biology
- Identification and characterization of essential genes in the human genome
- (2015) T. Wang et al. SCIENCE
- Identification of potential drug targets for tuberous sclerosis complex by synthetic screens combining CRISPR-based knockouts with RNAi
- (2015) Benjamin E. Housden et al. Science Signaling
- Identification of potential drug targets for tuberous sclerosis complex by synthetic screens combining CRISPR-based knockouts with RNAi
- (2015) Benjamin E. Housden et al. Science Signaling
- Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
- (2014) Luke A. Gilbert et al. CELL
- Microhomology-based choice of Cas9 nuclease target sites
- (2014) Sangsu Bae et al. NATURE METHODS
- Improved vectors and genome-wide libraries for CRISPR screening
- (2014) Neville E Sanjana et al. NATURE METHODS
- Functional genomics platform for pooled screening and generation of mammalian genetic interaction maps
- (2014) Martin Kampmann et al. Nature Protocols
- RNAi screening comes of age: improved techniques and complementary approaches
- (2014) Stephanie E. Mohr et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- DNA copy number evolution in Drosophila cell lines
- (2014) Hangnoh Lee et al. GENOME BIOLOGY
- Large-scale gene function analysis with the PANTHER classification system
- (2013) Huaiyu Mi et al. Nature Protocols
- Optimized gene editing technology for Drosophila melanogaster using germ line-specific Cas9
- (2013) X. Ren et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells
- (2013) Ophir Shalem et al. SCIENCE
- Protein Complex-Based Analysis Framework for High-Throughput Data Sets
- (2013) A. Vinayagam et al. Science Signaling
- An integrative approach to ortholog prediction for disease-focused and other functional studies
- (2011) Yanhui Hu et al. BMC BIOINFORMATICS
- Stringent Analysis of Gene Function and Protein-Protein Interactions Using Fluorescently Tagged Genes
- (2011) R. A. Neumuller et al. GENETICS
- On the Origins of Mendelian Disease Genes in Man: The Impact of Gene Duplication
- (2011) J. E. Dickerson et al. MOLECULAR BIOLOGY AND EVOLUTION
- Generation of stable Drosophila cell lines using multicistronic vectors
- (2011) Monika González et al. Scientific Reports
- Terminin: A protein complex that mediates epigenetic maintenance ofDrosophilatelomeres
- (2011) Grazia D. Raffa et al. Nucleus
- Inducible somatic oocyte destruction in response to rapamycin requires wild-type regulation of follicle cell epithelial polarity
- (2010) T C Thomson et al. CELL DEATH AND DIFFERENTIATION
- Verrocchio, a Drosophila OB fold-containing protein, is a component of the terminin telomere-capping complex
- (2010) G. D. Raffa et al. GENES & DEVELOPMENT
- A whole genome RNAi screen ofDrosophilaS2 cell spreading performed using automated computational image analysis
- (2010) Michael V. D'Ambrosio et al. JOURNAL OF CELL BIOLOGY
- Systematic Comparison of Constitutive Promoters and the Doxycycline-Inducible Promoter
- (2010) Jane Yuxia Qin et al. PLoS One
- TagDust--a program to eliminate artifacts from next generation sequencing data
- (2009) T. Lassmann et al. BIOINFORMATICS
- Intrakinetochore localization and essential functional domains of Drosophila Spc105
- (2009) Ralf B Schittenhelm et al. EMBO JOURNAL
- Unlocking the secrets of the genome
- (2009) Susan E. Celniker et al. NATURE
- Functional genomic screen reveals genes involved in lipid-droplet formation and utilization
- (2008) Yi Guo et al. NATURE
- Drosophila RNAi screen identifies host genes important for influenza virus replication
- (2008) Linhui Hao et al. NATURE
- Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes
- (2008) Michele Markstein et al. NATURE GENETICS
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