Intrinsic inference difficulties for trait evolution with Ornstein-Uhlenbeck models

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

(2014) Daniel L. Rabosky   PLoS One

A Novel Bayesian Method for Inferring and Interpreting the Dynamics of Adaptive Landscapes from Phylogenetic Comparative Data

(2014) Josef C. Uyeda et al.   SYSTEMATIC BIOLOGY

A Linear-Time Algorithm for Gaussian and Non-Gaussian Trait Evolution Models

(2014) Lam si Tung Ho et al.   SYSTEMATIC BIOLOGY

Asymptotic theory with hierarchical autocorrelation: Ornstein–Uhlenbeck tree models

(2013) Lam Si Tung Ho et al.   ANNALS OF STATISTICS

An integrative view of phylogenetic comparative methods: connections to population genetics, community ecology, and paleobiology

(2013) Matthew W. Pennell et al.   Annals of the New York Academy of Sciences

Modeling Gene Expression Evolution with an Extended Ornstein–Uhlenbeck Process Accounting for Within-Species Variation

(2013) Rori V. Rohlfs et al.   MOLECULAR BIOLOGY AND EVOLUTION

SURFACE: detecting convergent evolution from comparative data by fitting Ornstein-Uhlenbeck models with stepwise Akaike Information Criterion

(2013) Travis Ingram et al.   Methods in Ecology and Evolution

Unifying fossils and phylogenies for comparative analyses of diversification and trait evolution

(2013) Graham J. Slater et al.   Methods in Ecology and Evolution

Phylogenetic evidence for a shift in the mode of mammalian body size evolution at the Cretaceous-Palaeogene boundary

(2013) Graham J. Slater   Methods in Ecology and Evolution

IS YOUR PHYLOGENY INFORMATIVE? MEASURING THE POWER OF COMPARATIVE METHODS

(2012) Carl Boettiger et al.   EVOLUTION

MODELING STABILIZING SELECTION: EXPANDING THE ORNSTEIN-UHLENBECK MODEL OF ADAPTIVE EVOLUTION

(2012) Jeremy M. Beaulieu et al.   EVOLUTION

A phylogenetic comparative method for studying multivariate adaptation

(2012) Krzysztof Bartoszek et al.   JOURNAL OF THEORETICAL BIOLOGY

The global diversity of birds in space and time

(2012) W. Jetz et al.   NATURE

A NOVEL COMPARATIVE METHOD FOR IDENTIFYING SHIFTS IN THE RATE OF CHARACTER EVOLUTION ON TREES

(2011) Jonathan M. Eastman et al.   EVOLUTION

The evolution of gene expression levels in mammalian organs

(2011) David Brawand et al.   NATURE

Multiple routes to mammalian diversity

(2011) Chris Venditti et al.   NATURE

Exact posterior distributions and model selection criteria for multiple change-point detection problems

(2011) G. Rigaill et al.   STATISTICS AND COMPUTING

Running for Your Life or Running for Your Dinner: What Drives Fiber‐Type Evolution in Lizard Locomotor Muscles?

(2009) Jeffrey A. Scales et al.   AMERICAN NATURALIST

Recent assembly of the Cerrado, a neotropical plant diversity hotspot, by in situ evolution of adaptations to fire

(2009) M. F. Simon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Language Phylogenies Reveal Expansion Pulses and Pauses in Pacific Settlement

(2009) R. D. Gray et al.   SCIENCE

Analysis of comparative data with hierarchical autocorrelation

(2008) Cécile Ané   Annals of Applied Statistics

EVOLUTION TOWARD A NEW ADAPTIVE OPTIMUM: PHENOTYPIC EVOLUTION IN A FOSSIL STICKLEBACK LINEAGE

(2008) Gene Hunt et al.   EVOLUTION

THE ROLE OF POLLINATOR SHIFTS IN THE FLORAL DIVERSIFICATION OFIOCHROMA(SOLANACEAE)

(2008) Stacey DeWitt Smith et al.   EVOLUTION

Morphometrics of the Avian Small Intestine Compared with That of Nonflying Mammals: A Phylogenetic Approach

(2008) Shana R. Lavin et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY