Unifying fossils and phylogenies for comparative analyses of diversification and trait evolution

Recovering speciation and extinction dynamics based on phylogenies

(2013) T. Stadler   JOURNAL OF EVOLUTIONARY BIOLOGY

Testing the link between phenotypic evolution and speciation: an integrated palaeontological and phylogenetic analysis

(2013) Gene Hunt   Methods in Ecology and Evolution

Inclusion of a near-complete fossil record reveals speciation-related molecular evolution

(2013) Thomas H. G. Ezard et al.   Methods in Ecology and Evolution

A stochastic rate-calibrated method for time-scaling phylogenies of fossil taxa

(2013) David W. Bapst   Methods in Ecology and Evolution

INTEGRATING FOSSILS WITH MOLECULAR PHYLOGENIES IMPROVES INFERENCE OF TRAIT EVOLUTION

(2012) Graham J. Slater et al.   EVOLUTION

Trait-dependent diversification and the impact of palaeontological data on evolutionary hypothesis testing in New World ratsnakes (tribe Lampropeltini)

(2012) R. A. PYRON et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The reconstructed evolutionary process with the fossil record

(2012) Gilles Didier et al.   JOURNAL OF THEORETICAL BIOLOGY

Measuring rates of phenotypic evolution and the inseparability of tempo and mode

(2012) Gene Hunt   PALEOBIOLOGY

A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

paleotree: an R package for paleontological and phylogenetic analyses of evolution

(2012) David W. Bapst   Methods in Ecology and Evolution

A NOVEL COMPARATIVE METHOD FOR IDENTIFYING SHIFTS IN THE RATE OF CHARACTER EVOLUTION ON TREES

(2011) Jonathan M. Eastman et al.   EVOLUTION

Multiple routes to mammalian diversity

(2011) Chris Venditti et al.   NATURE

Divergence Time Estimation Using Fossils as Terminal Taxa and the Origins of Lissamphibia

(2011) R. Alexander Pyron   SYSTEMATIC BIOLOGY

Sampling-through-time in birth–death trees

(2010) Tanja Stadler   JOURNAL OF THEORETICAL BIOLOGY

Sequences, stratigraphy and scenarios: what can we say about the fossil record of the earliest tetrapods?

(2010) M. Friedman et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

When Can Decreasing Diversification Rates Be Detected with Molecular Phylogenies and the Fossil Record?

(2010) Lee Hsiang Liow et al.   SYSTEMATIC BIOLOGY

Diversity dynamics: molecular phylogenies need the fossil record

(2010) Tiago B. Quental et al.   TRENDS IN ECOLOGY & EVOLUTION

Watching the clock: Studying variation in rates of molecular evolution between species

(2010) Robert Lanfear et al.   TRENDS IN ECOLOGY & EVOLUTION

Fossils provide better estimates of ancestral body size than do extant taxa in fishes

(2009) James S. Albert et al.   ACTA ZOOLOGICA

DETECTION OF “PUNCTUATED EQUILIBRIUM” BY BAYESIAN ESTIMATION OF SPECIATION AND EXTINCTION RATES, ANCESTRAL CHARACTER STATES, AND RATES OF ANAGENETIC AND CLADOGENETIC EVOLUTION ON A MOLECULAR PHYLOGENY

(2008) Folmer Bokma   EVOLUTION