Review: Advances in methodology of DNA methylation assay

Analysis of global DNA methylation by hydrophilic interaction ultra high-pressure liquid chromatography tandem mass spectrometry

(2011) Jun-jie Zhang et al.   ANALYTICAL BIOCHEMISTRY

Genetics and epigenetics of the X chromosome

(2011) Céline Morey et al.   Annals of the New York Academy of Sciences

DNA methylation in glioblastoma: impact on gene expression and clinical outcome.

(2011) Amandine Etcheverry et al.   BMC GENOMICS

The era of epigenetics

(2011) P. J. Hurd   Briefings in Functional Genomics

Epigenetic Deregulation Across Chromosome 2q14.2 Differentiates Normal from Prostate Cancer and Provides a Regional Panel of Novel DNA Methylation Cancer Biomarkers

(2011) J. Devaney et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

(2011) Jordana T Bell et al.   GENOME BIOLOGY

Conformational Switching of G-Quadruplex DNA by Photoregulation

(2010) Xiaolin Wang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

CpG island hypermethylation of multiple tumor suppressor genes associated with loss of their protein expression during rat lung carcinogenesis induced by 3-methylcholanthrene and diethylnitrosamine

(2010) Wen-bin Liu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Global DNA methylation measurement by HPLC using low amounts of DNA

(2010) Kelly M. Armstrong et al.   Biotechnology Journal

DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas)

(2010) Mackenzie R Gavery et al.   BMC GENOMICS

Linking Epidemiology to Epigenomics--Where Are We Today?

(2010) C. M. Ulrich et al.   Cancer Prevention Research

DNA methylation and epigenetic control of cellular differentiation

(2010) David A. Khavari et al.   CELL CYCLE

Structure and Function of Mammalian DNA Methyltransferases

(2010) Renata Zofia Jurkowska et al.   CHEMBIOCHEM

Aptamer-based turn-on fluorescent four-branched quaternary ammonium pyrazine probe for selective thrombin detection

(2010) Shengyong Yan et al.   CHEMICAL COMMUNICATIONS

Multiplex detection of CpG methylation using microarray combining with target-selection-padlock probe

(2010) Xiaolong Shi et al.   CLINICA CHIMICA ACTA

Histone Variants in Metazoan Development

(2010) Laura A. Banaszynski et al.   DEVELOPMENTAL CELL

Increased Number of CpG Island Hypermethylation in Tumor Suppressor Genes of Non-Neoplastic Gastric Mucosa Correlates with Higher Risk of Gastric Cancer

(2010) Tomomitsu Tahara et al.   DIGESTION

Epigenetic Silencing of Somatostatin in Gastric Cancer

(2010) Kaya Jackson et al.   DIGESTIVE DISEASES AND SCIENCES

Epigenetic Turn Ons and Turn Offs: Chromatin Reorganization and Brain Differentiation

(2010) Anthony P. Auger et al.   ENDOCRINOLOGY

A novel method to assess the full genome methylation profile using monoclonal antibody combined with the high throughput based microarray approach

(2010) Ashwin Kelkar et al.   Epigenetics

DNA methylation in adult stem cells: New insights into self-renewal

(2010) Jennifer J. Trowbridge et al.   Epigenetics

Genomic imprinting in plant embryos

(2010) Stefan Scholten   Epigenetics

Expression divergence of TaMBD2 homoeologous genes encoding methyl CpG-binding domain proteins in wheat (Triticum aestivum L.)

(2010) Zhaorong Hu et al.   GENE

Genetic instability in inherited and sporadic leukemias

(2010) Henning D. Popp et al.   GENES CHROMOSOMES & CANCER

DNA Methylation and Genome Evolution in Honeybee: Gene Length, Expression, Functional Enrichment Covary with the Evolutionary Signature of DNA Methylation

(2010) Jia Zeng et al.   Genome Biology and Evolution

Epigenetics and gene expression

(2010) E R Gibney et al.   HEREDITY

Detection of genomic DNA methylation with denaturing high performance liquid chromatography

(2010) Romaica A OMARUDDIN et al.   Human Cell

Allele-specific DNA methylation: beyond imprinting

(2010) B. Tycko   HUMAN MOLECULAR GENETICS

Replication timing-related and gene body-specific methylation of active human genes

(2010) Dvir Aran et al.   HUMAN MOLECULAR GENETICS

Systems biology and epigenetic gene regulation

(2010) J.K. Choi   IET Systems Biology

Loss of promoter methylation contributes to the expression of functionally impaired PRDM1β isoform in diffuse large B-cell lymphoma

(2010) Yi-Wen Zhang et al.   INTERNATIONAL JOURNAL OF HEMATOLOGY

Binding of the Rett syndrome protein, MeCP2, to methylated and unmethylated DNA and chromatin

(2010) Jeffrey C. Hansen et al.   IUBMB LIFE

DNA Methyltransferase 1-associated Protein (DMAP1) Is a Co-repressor That Stimulates DNA Methylation Globally and Locally at Sites of Double Strand Break Repair

(2010) Gun E. Lee et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

DNA methylation detection using MS-qFRET, a quantum dot-based nanoassay

(2010) Vasudev J. Bailey et al.   METHODS

DNA methylation profiling using bisulfite-based epityping of pooled genomic DNA

(2010) Sophia J. Docherty et al.   METHODS

Epigenetics: Tales of adversity

(2010) Farooq Ahmed   NATURE

Epigenetic modifications and human disease

(2010) Anna Portela et al.   NATURE BIOTECHNOLOGY

Fluorescent conjugated polymer-based FRET technique for detection of DNA methylation of cancer cells

(2010) Fude Feng et al.   Nature Protocols

Demethylation links cell fate and cancer

(2010) Meera Swami   NATURE REVIEWS GENETICS

Phenomics: the next challenge

(2010) David Houle et al.   NATURE REVIEWS GENETICS

Chemical discrimination between dC and 5Me dC via their hydroxylamine adducts

(2010) Martin Münzel et al.   NUCLEIC ACIDS RESEARCH

CpG island hypermethylation-associated silencing of non-coding RNAs transcribed from ultraconserved regions in human cancer

(2010) A Lujambio et al.   ONCOGENE

CpG Demethylation Enhances Alpha-Synuclein Expression and Affects the Pathogenesis of Parkinson's Disease

(2010) Lumine Matsumoto et al.   PLoS One

CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors

(2010) S. Branciamore et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide analysis reveals methyl-CpG-binding protein 2-dependent regulation of microRNAs in a mouse model of Rett syndrome

(2010) H. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Promoter CpG island hypermethylation during breast cancer progression

(2010) So Yeon Park et al.   VIRCHOWS ARCHIV

Histone modifications and chromatin organization in prostate cancer

(2010) Zhong Chen et al.   Epigenomics

Molecular coupling of DNA methylation and histone methylation

(2010) Hideharu Hashimoto et al.   Epigenomics

Genome-scale DNA methylation analysis

(2010) Shaun D Fouse et al.   Epigenomics

The DNA Methylome of Human Peripheral Blood Mononuclear Cells

(2010) Yingrui Li et al.   PLOS BIOLOGY

Epigenomics in cancer management

(2010) Fabricio Costa   Cancer Management and Research

Formamide as a denaturant for bisulfite conversion of genomic DNA: Bisulfite sequencing of the GSTPi and RARβ2 genes of 43 formalin-fixed paraffin-embedded prostate cancer specimens

(2009) Gerald Zon et al.   ANALYTICAL BIOCHEMISTRY

Fluorescence Polarization Combined Capillary Electrophoresis Immunoassay for the Sensitive Detection of Genomic DNA Methylation

(2009) Xiaoli Wang et al.   ANALYTICAL CHEMISTRY

CpG island methylation pattern in different human tissues and its correlation with gene expression

(2009) Shicai Fan et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A novel mechanism of epigenetic regulation: Nucleosome-space occupancy

(2009) Peng Cui et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Osmium Complexation of Mismatched DNA: Effect of the Bases Adjacent to Mismatched 5-Methylcytosine

(2009) Akiko Nomura et al.   BIOCONJUGATE CHEMISTRY

CpG islands or CpG clusters: how to identify functional GC-rich regions in a genome?

(2009) Leng Han et al.   BMC BIOINFORMATICS

High fluorescence selectivity and visual detection ofG-quadruplex structures by a novel dinuclear ruthenium complex

(2009) Liang Xu et al.   CHEMICAL COMMUNICATIONS

Sensitive and Visual Detection of Adenosine by a Rationally Designed FokI-Based Biosensing Strategy

(2009) Ming Zhang et al.   Chemistry-An Asian Journal

X Chromosome Inactivation and Autoimmunity

(2009) Wesley H. Brooks   CLINICAL REVIEWS IN ALLERGY & IMMUNOLOGY

Determination of DNA methylation by COBRA: A comparative study of CGE with LIF detection and conventional gel electrophoresis

(2009) Simon Goedecke et al.   ELECTROPHORESIS

MS-qFRET: A quantum dot-based method for analysis of DNA methylation

(2009) V. J. Bailey et al.   GENOME RESEARCH

Ribonucleosidelabeling with Os(vi): A methodological approach to evaluation of RNA methylation by HPLC-ICP-MS

(2009) Katarzyna Wrobel et al.   Metallomics

Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylation

(2009) Sitharthan Kamalakaran et al.   NUCLEIC ACIDS RESEARCH

Rapid quantification of global DNA methylation by isocratic cation exchange high-performance liquid chromatography

(2008) Wilfried Rozhon et al.   ANALYTICAL BIOCHEMISTRY

Study of the base discrimination ability of DNA and 2′-O-methylated RNA oligomers containing 2-thiouracil bases towards complementary RNA or DNA strands and their application to single base mismatch detection

(2008) Itaru Okamoto et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Restriction Site-Specific Methylation Studies of Imprinted Genes with Quantitative Real-Time PCR

(2008) S. Bruce et al.   CLINICAL CHEMISTRY

A Nanocarbon Film Electrode as a Platform for Exploring DNA Methylation

(2008) Dai Kato et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Highly Effective Colorimetric and Visual Detection of Nucleic Acids Using an Asymmetrically Split Peroxidase DNAzyme

(2008) Minggang Deng et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Fluorescent Conjugated Polyelectrolyte as an Indicator for Convenient Detection of DNA Methylation

(2008) Fude Feng et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Genome Areas with High Gene Density and CpG Island Neighborhood Strongly Attract Porcine Endogenous Retrovirus for Integration and Favor the Formation of Hot Spots

(2008) Y. Moalic et al.   JOURNAL OF VIROLOGY

Cationic Conjugated Polyelectrolyte/Molecular Beacon Complex for Sensitive, Sequence-Specific, Real-Time DNA Detection

(2008) Xuli Feng et al.   LANGMUIR

Synthesis and characterization of the 5-methyl-2′-deoxycytidine glycol–dioxoosmium–bipyridine ternary complex in DNA

(2008) Tadashi Umemoto et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Chemical approach toward efficient DNA methylation analysis

(2008) Akimitsu Okamoto   ORGANIC & BIOMOLECULAR CHEMISTRY

A Novel CpG Island Set Identifies Tissue-Specific Methylation at Developmental Gene Loci

(2008) Robert Illingworth et al.   PLOS BIOLOGY

Selective Detection of 5-Methylcytosine Sites in DNA

(2007) Sébastian Bareyt et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Fluorometric Identification of 5-Methylcytosine Modification in DNA: Combination of Photosensitized Oxidation and Invasive Cleavage

(2007) Hisatsugu Yamada et al.   BIOCONJUGATE CHEMISTRY

Photocurrent response after enzymatic treatment of DNA duplexes immobilized on gold electrodes: electrochemical discrimination of 5-methylcytosine modification in DNA

(2007) Hisatsugu Yamada et al.   ORGANIC & BIOMOLECULAR CHEMISTRY