Inter-individual differences in response to dietary intervention: integrating omics platforms towards personalised dietary recommendations

Nutritional Metabolomics: Progress in Addressing Complexity in Diet and Health

(2012) Dean P. Jones et al.   Annual Review of Nutrition

Transcriptional and metabolic data integration and modeling for identification of active pathways

(2012) A. Jauhiainen et al.   BIOSTATISTICS

Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts

(2012) C. Lozupone et al.   GENOME RESEARCH

Gut Microbial Metabolism of Polyphenols from Black Tea and Red Wine/Grape Juice Is Source-Specific and Colon-Region Dependent

(2012) F. A. van Dorsten et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Metaboloepigenetics: Interrelationships between energy metabolism and epigenetic control of gene expression

(2012) Dallas R. Donohoe et al.   JOURNAL OF CELLULAR PHYSIOLOGY

454 Pyrosequencing Reveals a Shift in Fecal Microbiota of Healthy Adult Men Consuming Polydextrose or Soluble Corn Fiber

(2012) Seema Hooda et al.   JOURNAL OF NUTRITION

Alternative Dietary Indices Both Strongly Predict Risk of Chronic Disease

(2012) Stephanie E. Chiuve et al.   JOURNAL OF NUTRITION

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Genome-wide association meta-analysis identifies new endometriosis risk loci

(2012) Dale R Nyholt et al.   NATURE GENETICS

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

The Role of Genomics in Health Behavior Change: Challenges and Opportunities

(2012) A.D. Bryan et al.   Public Health Genomics

Assessment of the Effect of High or Low Protein Diet on the Human Urine Metabolome as Measured by NMR

(2012) Lone G. Rasmussen et al.   Nutrients

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

A Meta-Analysis and Genome-Wide Association Study of Platelet Count and Mean Platelet Volume in African Americans

(2012) Rehan Qayyum et al.   PLoS Genetics

A Genome-Wide Association Meta-Analysis of Circulating Sex Hormone–Binding Globulin Reveals Multiple Loci Implicated in Sex Steroid Hormone Regulation

(2012) Andrea D. Coviello et al.   PLoS Genetics

High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health

(2011) Wendy R Russell et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Integrative set enrichment testing for multiple omics platforms

(2011) Laila M Poisson et al.   BMC BIOINFORMATICS

A whole-grain cereal-rich diet increases plasma betaine, and tends to decrease total and LDL-cholesterol compared with a refined-grain diet in healthy subjects

(2011) Alastair B. Ross et al.   BRITISH JOURNAL OF NUTRITION

Urinary Biomarkers of Meat Consumption

(2011) A. J. Cross et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

Metabolomic Profiling Reveals Potential Markers and Bioprocesses Altered in Bladder Cancer Progression

(2011) N. Putluri et al.   CANCER RESEARCH

Microbiome and Malignancy

(2011) Claudia S. Plottel et al.   Cell Host & Microbe

The Microbiome and Butyrate Regulate Energy Metabolism and Autophagy in the Mammalian Colon

(2011) Dallas R. Donohoe et al.   Cell Metabolism

UGT1A6 and UGT2B15 Polymorphisms and Acetaminophen Conjugation in Response to a Randomized, Controlled Diet of Select Fruits and Vegetables

(2011) S. L. Navarro et al.   DRUG METABOLISM AND DISPOSITION

Nuclear Magnetic Resonance–Based Metabolomics Enable Detection of the Effects of a Whole Grain Rye and Rye Bran Diet on the Metabolic Profile of Plasma in Prostate Cancer Patients

(2011) Ali A. Moazzami et al.   JOURNAL OF NUTRITION

A Low-Glycemic Load Diet Reduces Serum C-Reactive Protein and Modestly Increases Adiponectin in Overweight and Obese Adults

(2011) Marian L. Neuhouser et al.   JOURNAL OF NUTRITION

Metabolomics Unveils Urinary Changes in Subjects with Metabolic Syndrome following 12-Week Nut Consumption

(2011) Sara Tulipani et al.   JOURNAL OF PROTEOME RESEARCH

Stability and Robustness of Human Metabolic Phenotypes in Response to Sequential Food Challenges

(2011) Silke S. Heinzmann et al.   JOURNAL OF PROTEOME RESEARCH

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

A genome-wide association study of metabolic traits in human urine

(2011) Karsten Suhre et al.   NATURE GENETICS

Changes in dominant groups of the gut microbiota do not explain cereal-fiber induced improvement of whole-body insulin sensitivity

(2011) Martin O Weickert et al.   Nutrition & Metabolism

Cruciferous vegetable supplementation in a controlled diet study alters the serum peptidome in a GSTM1-genotype dependent manner

(2011) Heather Ann Brauer et al.   Nutrition Journal

Towards the Human Colorectal Cancer Microbiome

(2011) Julian R. Marchesi et al.   PLoS One

Metabolomic Profiling Reveals a Role for Androgen in Activating Amino Acid Metabolism and Methylation in Prostate Cancer Cells

(2011) Nagireddy Putluri et al.   PLoS One

Metabolic profiling strategy for discovery of nutritional biomarkers: proline betaine as a marker of citrus consumption

(2010) Silke S Heinzmann et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

A Pyrosequencing Study in Twins Shows That Gastrointestinal Microbial Profiles Vary With Inflammatory Bowel Disease Phenotypes

(2010) Ben P. Willing et al.   GASTROENTEROLOGY

Metabolomics Study of Human Urinary Metabolome Modifications After Intake of Almond (Prunus dulcis(Mill.) D.A. Webb) Skin Polyphenols

(2010) Rafael Llorach et al.   JOURNAL OF PROTEOME RESEARCH

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Sparse canonical methods for biological data integration: application to a cross-platform study

(2009) Kim-Anh Lê Cao et al.   BMC BIOINFORMATICS

A structured overview of simultaneous component based data integration

(2009) Katrijn Van Deun et al.   BMC BIOINFORMATICS

Modulation of Human Serum Glutathione S-Transferase A1/2 Concentration by Cruciferous Vegetables in a Controlled Feeding Study Is Influenced by GSTM1 and GSTT1 Genotypes

(2009) S. L. Navarro et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

Human Gut Bacterial Communities Are Altered by Addition of Cruciferous Vegetables to a Controlled Fruit- and Vegetable-Free Diet

(2009) Fei Li et al.   JOURNAL OF NUTRITION

An LC-MS-Based Metabolomics Approach for Exploring Urinary Metabolome Modifications after Cocoa Consumption

(2009) Rafael Llorach et al.   JOURNAL OF PROTEOME RESEARCH

Assessing individual metabolic responsiveness to a lipid challenge using a targeted metabolomic approach

(2008) Angela M. Zivkovic et al.   Metabolomics

Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci

(2008) Jason D Cooper et al.   NATURE GENETICS

Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer

(2008)   NATURE GENETICS

Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes

(2008) Eleftheria Zeggini et al.   NATURE GENETICS

Genetics Meets Metabolomics: A Genome-Wide Association Study of Metabolite Profiles in Human Serum

(2008) Christian Gieger et al.   PLoS Genetics