Ultrahigh-Density Linkage Map for Cultivated Cucumber (Cucumis sativus L.) Using a Single-Nucleotide Polymorphism Genotyping Array

Ancient orphan crop joins modern era: gene-based SNP discovery and mapping in lentil

(2013) Andrew G Sharpe et al.   BMC GENOMICS

A 1,681-locus consensus genetic map of cultivated cucumber including 67 NB-LRR resistance gene homolog and ten gene loci

(2013) Luming Yang et al.   BMC PLANT BIOLOGY

Marker Density and Read Depth for Genotyping Populations Using Genotyping-by-Sequencing

(2013) T. M. Beissinger et al.   GENETICS

Development of high-density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners

(2013) Nathalie Pavy et al.   Molecular Ecology Resources

A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity

(2013) Jianjian Qi et al.   NATURE GENETICS

Next-generation sequencing, FISH mapping and synteny-based modeling reveal mechanisms of decreasing dysploidy inCucumis

(2013) Luming Yang et al.   PLANT JOURNAL

Vitis Phylogenomics: Hybridization Intensities from a SNP Array Outperform Genotype Calls

(2013) Allison J. Miller et al.   PLoS One

QTL mapping of powdery mildew resistance in WI 2757 cucumber (Cucumis sativus L.)

(2013) Xiaoming He et al.   THEORETICAL AND APPLIED GENETICS

Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array

(2012) Laima Antanaviciute et al.   BMC GENOMICS

Association mapping in forest trees and fruit crops

(2012) M. A. Khan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Whole-genome strategies for marker-assisted plant breeding

(2012) Yunbi Xu et al.   MOLECULAR BREEDING

Chromosome rearrangements during domestication of cucumber as revealed by high-density genetic mapping and draft genome assembly

(2012) Luming Yang et al.   PLANT JOURNAL

Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm

(2012) Ignazio Verde et al.   PLoS One

Development of a Large SNP Genotyping Array and Generation of High-Density Genetic Maps in Tomato

(2012) Sung-Chur Sim et al.   PLoS One

Genetic Diversity and Population Structure of Cucumber (Cucumis sativus L.)

(2012) Jing Lv et al.   PLoS One

An integrated molecular cytogenetic map of Cucumis sativus L. chromosome 2

(2011) Yonghua Han et al.   BMC GENETICS

Syntenic relationships between cucumber (Cucumis sativus L.) and melon (C. melo L.) chromosomes as revealed by comparative genetic mapping

(2011) Dawei Li et al.   BMC GENOMICS

Development of genome-wide SNP assays for rice

(2011) Susan R. McCouch et al.   BREEDING SCIENCE

Genome structural variation discovery and genotyping

(2011) Can Alkan et al.   NATURE REVIEWS GENETICS

SyMAP v3.4: a turnkey synteny system with application to plant genomes

(2011) Carol Soderlund et al.   NUCLEIC ACIDS RESEARCH

Recombination frequency variation in maize as revealed by genomewide single-nucleotide polymorphisms

(2011) Mohammad Farkhari et al.   PLANT BREEDING

The Genome Sequence of the North-European Cucumber (Cucumis sativus L.) Unravels Evolutionary Adaptation Mechanisms in Plants

(2011) Rafał Wóycicki et al.   PLoS One

Construction of a high density integrated genetic map for cucumber (Cucumis sativus L.)

(2011) Wei-Wei Zhang et al.   THEORETICAL AND APPLIED GENETICS

Fine genetic mapping of cp: a recessive gene for compact (dwarf) plant architecture in cucumber, Cucumis sativus L.

(2011) Yuhong Li et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Spatial normalization improves the quality of genotype calling for Affymetrix SNP 6.0 arrays

(2010) High Seng Chai et al.   BMC BIOINFORMATICS

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)

(2010) Pablo F Cavagnaro et al.   BMC GENOMICS

Optimized detection of sequence variation in heterozygous genomes using DNA microarrays with isothermal-melting probes

(2010) D. Gresham et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing

(2010) W. Xie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of missing marker and segregation distortion on QTL mapping in F2 populations

(2010) Luyan Zhang et al.   THEORETICAL AND APPLIED GENETICS

Quantifying uncertainty in genotype calls

(2009) Benilton S. Carvalho et al.   BIOINFORMATICS

High-throughput SNP genotyping with the GoldenGate assay in maize

(2009) Jianbing Yan et al.   MOLECULAR BREEDING

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS

An Integrated Genetic and Cytogenetic Map of the Cucumber Genome

(2009) Yi Ren et al.   PLoS One

Genetic mapping and QTL analysis of fruit and flower related traits in cucumber (Cucumis sativus L.) using recombinant inbred lines

(2008) X. J. Yuan et al.   EUPHYTICA

A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate

(2008) M. A.M. Groenen et al.   GENOME RESEARCH

Array-based high-throughput DNA markers for crop improvement

(2008) P K Gupta et al.   HEREDITY

Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays

(2008) Shin Lin et al.   GENOME BIOLOGY

Marker-assisted selection: an approach for precision plant breeding in the twenty-first century

(2007) B. C.Y Collard et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic linkage map construction and location of QTLs for fruit-related traits in cucumber

(2007) X. J. Yuan et al.   PLANT BREEDING