Comparative Transcriptome Analysis of Two Oysters, Crassostrea gigas and Crassostrea hongkongensis Provides Insights into Adaptation to Hypo-Osmotic Conditions
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Title
Comparative Transcriptome Analysis of Two Oysters, Crassostrea gigas and Crassostrea hongkongensis Provides Insights into Adaptation to Hypo-Osmotic Conditions
Authors
Keywords
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Journal
PLoS One
Volume 9, Issue 11, Pages e111915
Publisher
Public Library of Science (PLoS)
Online
2014-11-05
DOI
10.1371/journal.pone.0111915
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- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
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